RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NKX2-1P43699 371 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 SPCS3P61009 180 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 GNB2P62879 340 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 RPL39P5Q59GN2 51 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 SPSB3Q6PJ21 355 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 IL34Q6ZMJ4 242 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 PRIMA1Q86XR5 153 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 VKORC1L1Q8N0U8 176 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 TRAV30A0A087WSZ9 112 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 TSTD3H0UI37 97 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 HIST1H1EP10412 219 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 RAB5AP20339 215 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 GZMHP20718 246 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 FUT3P21217 361 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 HAAOP46952 286 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 IL13RA2Q14627 380 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 C18orf65Q6ZTR6 163 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 FOXRED2Q8IWF2 684 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM147Q9BVK8 224 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 BEX1Q9HBH7 125 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 LPAR2Q9HBW0 351 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 PRNDQ9UKY0 176 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 LRP2P98164 4655 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 CLPSL1A2RUU4 121 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 OOEPA6NGQ2 149 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 RGS13O14921 159 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 OR9G9P0C7N8 305 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 DAOP14920 347 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 CD83Q01151 205 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 IAH1Q2TAA2 248 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 FAM120AOSQ5T036 256 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM268Q5VZI3 342 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 RPL7L1Q6DKI1 246 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 OR52L2PQ8NGH6 319 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 OR4S2Q8NH73 311 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 NIPSNAP3BQ9BS92 247 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM167BQ9NRX6 74 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 C17orf100A8MU93 164 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 PPP1CCP36873 323 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 LGALS7P47929 136 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 ATXN7L3Q14CW9 347 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 SRSF7Q16629 238 aaKnown RBP eCLIP4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 WDR73Q6P4I2 378 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 WFDC8Q8IUA0 241 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 SAXO1Q8IYX7 474 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 EIF4E3Q8N5X7 224 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 RPEQ96AT9 228 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 PRDM13Q9H4Q3 707 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF665Q9H7R5 613 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 CLEC5AQ9NY25 188 aa4.44□□□□□ -1.7
TOPBP1-201ENST00000260810 I3L521 148 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 CCSO14618 274 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 DEDDO75618 318 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 MC5RP33032 325 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 VDAC2P45880 294 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 WT1-ASQ06250 92 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 MORN2Q502X0 79 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM41BQ5BJD5 291 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 BEX5Q5H9J7 111 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 LYZL2Q7Z4W2 148 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 ADAT1Q9BUB4 502 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 CBY1Q9Y3M2 126 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 TRAV6A0A075B6T7 132 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 PLATP00750 562 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 KRASP01116 189 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 STAG3L2P0CL84 134 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 PRB4P10163 310 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 EDDM3BP56851 147 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 RAB4BP61018 213 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 FAM74A3Q4VXF1 159 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 CXorf66Q5JRM2 361 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 BPIFCQ8NFQ6 507 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 HSPB9Q9BQS6 159 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 C7orf69Q9H7B7 122 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 MED9Q9NWA0 146 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 A0A1W2PPE3 182 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 OR2T8A6NH00 312 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 F8W036 122 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 COX7A2P2O60397 106 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 CDKN1AP38936 164 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 RPL13AP40429 203 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 KLRD1Q13241 179 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM155Q4W5P6 130 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 CLEC2AQ6UVW9 174 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 MEX3BQ6ZN04 569 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 SCARB1Q8WTV0 552 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 NEU4Q8WWR8 484 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 GNB4Q9HAV0 340 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 MANBALQ9NQG1 85 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 IL19Q9UHD0 177 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 ST3GAL6Q9Y274 331 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 TRIM77I1YAP6 450 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 IGHV4-38-2P0DP08 117 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 PDLIM4P50479 330 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 OR5A2Q8NGI9 324 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 IL1F10Q8WWZ1 152 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 GALNT14Q96FL9 552 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 C2orf50Q96LR7 162 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 SERTAD4Q9NUC0 356 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 RNF7Q9UBF6 113 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms