RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 NTF3P20783 257 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 SSTP61278 116 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 OR4A47Q6IF82 309 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 OR10W1Q8NGF6 305 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 EREGO14944 169 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 PDE6DO43924 150 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 GFRA3O60609 400 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 MMP23AO75900 390 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 TEPPQ6URK8 271 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 PQLC2Q6ZP29 291 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 CMTM2Q8TAZ6 248 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
VHL-201ENST00000256474 NPVFQ9HCQ7 196 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 CLCF1Q9UBD9 225 aa11.15□□□□□ -0.62
VHL-201ENST00000256474 F2Z2F3 143 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 MGST3O14880 152 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 KLF3P57682 345 aaPredicted RBP11.14□□□□□ -0.63
VHL-201ENST00000256474 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 LURAP1LQ8IV03 231 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 OR1L6Q8NGR2 347 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 TUBG2Q9NRH3 451 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 AHRRA9YTQ3 701 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 J3QR06 171 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 CXorf1O96002 111 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 GCHFRP30047 84 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 FAM27E3Q08E93 113 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 ARSJQ5FYB0 599 aaPredicted RBP11.14□□□□□ -0.63
VHL-201ENST00000256474 OR4S2Q8NH73 311 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 HSPB9Q9BQS6 159 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 NAT8BQ9UHF3 227 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 IGHV3-72A0A0B4J1Y9 119 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 H3BTX0 84 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 IGKV1-16P04430 117 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 CRISP2P16562 243 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 OR10J1P30954 320 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 CT45A1Q5HYN5 189 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 TEX38Q6PEX7 206 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 CISD2Q8N5K1 135 aaKnown RBP11.14□□□□□ -0.63
VHL-201ENST00000256474 CT45A3Q8NHU0 189 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
VHL-201ENST00000256474 TRGV10A0A0A0MS01 117 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 IGKV3-15P01624 115 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 REG1AP05451 166 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 EFNB3Q15768 340 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 NAV3Q8IVL0 2385 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 TRAV17A0A0B4J275 112 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 A8MXE2 369 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 ENSAO43768 121 aaKnown RBP11.13□□□□□ -0.63
VHL-201ENST00000256474 DLX1P56177 255 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 SELENOVP59797 346 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 RELBQ01201 579 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 IQCJQ1A5X6 159 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 WFDC8Q8IUA0 241 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 RHOBP62745 196 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 TNFAIP6P98066 277 aaPredicted RBP11.13□□□□□ -0.63
VHL-201ENST00000256474 TDRG1Q3Y452 100 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 OR9G1Q8NH87 305 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 LINC00479Q96M42 142 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 MRPL18Q9H0U6 180 aaKnown RBP11.13□□□□□ -0.63
VHL-201ENST00000256474 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 HES4Q9HCC6 221 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 COL6A6A6NMZ7 2263 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 TANC2Q9HCD6 1990 aa11.13□□□□□ -0.63
VHL-201ENST00000256474 TRAV34A0A0B4J273 112 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 IRF2P14316 349 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 CHRNB4P30926 498 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 SRP14P37108 136 aaKnown RBP11.12□□□□□ -0.63
VHL-201ENST00000256474 RNF151Q2KHN1 245 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 PRO3102Q9H379 93 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 KCNIP2Q9NS61 270 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 SLC35D1Q9NTN3 355 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 ANKRD11Q6UB99 2663 aaPredicted RBP11.12□□□□□ -0.63
VHL-201ENST00000256474 TRAV5A0A0B4J249 113 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 SERF1AO75920 110 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 GNG4P50150 75 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 PARD6AQ9NPB6 346 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 PRR33A8MZF0 331 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 OR5G3P0C626 314 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 P0C879 139 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 CCL3L1P16619 93 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
VHL-201ENST00000256474 STARD4Q96DR4 205 aa11.12□□□□□ -0.63
VHL-201ENST00000256474 LOC102724200A0A096LPH7 203 aaPredicted RBP11.11□□□□□ -0.63
VHL-201ENST00000256474 TCAPO15273 167 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 GGCTO75223 188 aaKnown RBP11.11□□□□□ -0.63
VHL-201ENST00000256474 CENPWQ5EE01 88 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 CCL17Q92583 94 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 HELTA6NFD8 242 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 KRTCAP3Q53RY4 240 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 ATOH7Q8N100 152 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 ELOVL5Q9NYP7 299 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 NAGKQ9UJ70 344 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 A8MWP6 167 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 OR2T6Q8NHC8 308 aa11.11□□□□□ -0.63
VHL-201ENST00000256474 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms