RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TTC9CQ8N5M4 171 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 LFNGQ8NES3 379 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 OR5M8Q8NGP6 311 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 FAM103A1Q9BTL3 118 aaKnown RBP11.06□□□□□ -0.64
VPS25-201ENST00000253794 IGLC7A0M8Q6 106 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 PSMB11A5LHX3 300 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 NPIPB5A8MRT5 1133 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 G3V318 75 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 H3BUA1 57 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 ST8SIA3O43173 380 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 ADAP1O75689 374 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 CRYGCP07315 174 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 HOXB5P09067 269 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 ECSCRQ19T08 205 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 FAM110DQ8TAY7 271 aaPredicted RBP11.05□□□□□ -0.64
VPS25-201ENST00000253794 MYOZ3Q8TDC0 251 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 MDFIQ99750 246 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 HSPB7Q9UBY9 170 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 LINC00527Q9UJ94 153 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 WSB1Q9Y6I7 421 aa11.05□□□□□ -0.64
VPS25-201ENST00000253794 STAB1Q9NY15 2570 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 FAM90A26D6RGX4 464 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 SOX15O60248 233 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 IFNA21P01568 189 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 ELANEP08246 267 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 CTRB1P17538 263 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 PSMB8P28062 276 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 KRTAP10-3P60369 221 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 SPCS3P61009 180 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 FOXE3Q13461 319 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 CTRB2Q6GPI1 263 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 TEX38Q6PEX7 206 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 UNQ5815/PRO19632Q6UWF5 114 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 CENPVQ7Z7K6 275 aaPredicted RBP11.04□□□□□ -0.64
VPS25-201ENST00000253794 ABHD5Q8WTS1 349 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 CITED1Q99966 193 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 ZNF747Q9BV97 191 aa11.04□□□□□ -0.64
VPS25-201ENST00000253794 A0A1W2PN81 502 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 RBMXL2O75526 392 aaKnown RBP11.03□□□□□ -0.64
VPS25-201ENST00000253794 CHRNA7P36544 502 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 WT1-ASQ06250 92 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 TNFRSF9Q07011 255 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 TCTEX1D4Q5JR98 221 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 C10orf99Q6UWK7 81 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 ZNF114Q8NC26 417 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 OR5AU1Q8NGC0 362 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 FYTTD1Q96QD9 318 aaKnown RBP11.03□□□□□ -0.64
VPS25-201ENST00000253794 PDCD10Q9BUL8 212 aa11.03□□□□□ -0.64
VPS25-201ENST00000253794 HMX3A6NHT5 357 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 MPTX1A8MV57 137 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 FBXO24O75426 580 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 OPN1MWP04001 364 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 OPN1MW2P0DN77 364 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 OPN1MW3P0DN78 364 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 AREGP15514 252 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 PSMB6P28072 239 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 CD83Q01151 205 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 ZNF329Q86UD4 541 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 MRPL41Q8IXM3 137 aaKnown RBP11.02□□□□□ -0.65
VPS25-201ENST00000253794 OR10W1Q8NGF6 305 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 OR4D5Q8NGN0 318 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 OR10C1Q96KK4 312 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 SLA2Q9H6Q3 261 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 ALG5Q9Y673 324 aa11.02□□□□□ -0.65
VPS25-201ENST00000253794 TRBV9A0A0B4J1U6 114 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 IFNA17P01571 189 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 ID3Q02535 119 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 IL15RAQ13261 267 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 BSXQ3C1V8 233 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 PVRIGQ6DKI7 326 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 OR2C3Q8N628 320 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 ZBTB8BQ8NAP8 495 aaPredicted RBP11.01□□□□□ -0.65
VPS25-201ENST00000253794 OR1S1Q8NH92 325 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 PLEKHA3Q9HB20 300 aa11.01□□□□□ -0.65
VPS25-201ENST00000253794 TET2Q6N021 2002 aaPredicted RBP11.01□□□□□ -0.65
VPS25-201ENST00000253794 HAX1O00165 279 aa11□□□□□ -0.65
VPS25-201ENST00000253794 LY86O95711 162 aa11□□□□□ -0.65
VPS25-201ENST00000253794 OR13C7P0DN81 318 aa11□□□□□ -0.65
VPS25-201ENST00000253794 KIAA0141Q14154 515 aaPredicted RBP11□□□□□ -0.65
VPS25-201ENST00000253794 C2orf68Q2NKX9 166 aa11□□□□□ -0.65
VPS25-201ENST00000253794 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
VPS25-201ENST00000253794 C12orf54Q6X4T0 127 aa11□□□□□ -0.65
VPS25-201ENST00000253794 OR5T1Q8NG75 326 aa11□□□□□ -0.65
VPS25-201ENST00000253794 OR1L6Q8NGR2 347 aa11□□□□□ -0.65
VPS25-201ENST00000253794 HINT2Q9BX68 163 aa11□□□□□ -0.65
VPS25-201ENST00000253794 ZFP57Q9NU63 452 aa11□□□□□ -0.65
VPS25-201ENST00000253794 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
VPS25-201ENST00000253794 IGLV11-55A0A075B6I3 123 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 CCSO14618 274 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 SSNA1O43805 119 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 APELAP0DMC3 54 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 CD28P10747 220 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 HIST1H1BP16401 226 aaKnown RBP10.99□□□□□ -0.65
VPS25-201ENST00000253794 HOXA1P49639 335 aaPredicted RBP10.99□□□□□ -0.65
VPS25-201ENST00000253794 RAB9AP51151 201 aa10.99□□□□□ -0.65
VPS25-201ENST00000253794 ERHP84090 104 aaKnown RBP10.99□□□□□ -0.65
VPS25-201ENST00000253794 SRSF4Q08170 494 aaKnown RBP10.99□□□□□ -0.65
VPS25-201ENST00000253794 CXorf66Q5JRM2 361 aaPredicted RBP10.99□□□□□ -0.65
VPS25-201ENST00000253794 GSG1LQ6UXU4 331 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms