RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CT45A3Q8NHU0 189 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 C2orf88Q9BSF0 95 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 NDUFAF3Q9BU61 184 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 PLSCR4Q9NRQ2 329 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 OTOGLQ3ZCN5 2332 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 CRYBB3P26998 211 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 SUMO1P63165 101 aaKnown RBP15.23■□□□□ 0.03
LRP3-201ENST00000253193 PAX5Q02548 391 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 PLA2G2CQ5R387 149 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 UTF1Q5T230 341 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 TOMM20LQ6UXN7 152 aa15.23■□□□□ 0.03
LRP3-201ENST00000253193 OR10J1P30954 320 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 MIR17HGQ75NE6 70 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 CMTM2Q8TAZ6 248 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 CORO2AQ92828 525 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 IFI27L2Q9H2X8 130 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 CRISP2P16562 243 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 EFNB3Q15768 340 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 MOB3BQ86TA1 216 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 HELTA6NFD8 242 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 P0C879 139 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 FXYD3Q14802 87 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 CCL17Q92583 94 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 NAT8BQ9UHF3 227 aa15.22■□□□□ 0.03
LRP3-201ENST00000253193 ZNF318Q5VUA4 2279 aa15.21■□□□□ 0.03
LRP3-201ENST00000253193 ZNF891A8MT65 544 aaPredicted RBP15.21■□□□□ 0.03
LRP3-201ENST00000253193 RBFOX2O43251 390 aaKnown RBP eCLIP15.21■□□□□ 0.035e-9■■■□□ 18.4
LRP3-201ENST00000253193 MBNL2Q5VZF2 373 aaKnown RBP15.21■□□□□ 0.03
LRP3-201ENST00000253193 OR10X1Q8NGY0 326 aa15.21■□□□□ 0.03
LRP3-201ENST00000253193 SNURFLB1AK76 121 aa15.21■□□□□ 0.03
LRP3-201ENST00000253193 DOLPP1Q86YN1 238 aa15.21■□□□□ 0.03
LRP3-201ENST00000253193 OR1L6Q8NGR2 347 aa15.21■□□□□ 0.03
LRP3-201ENST00000253193 SNRNP40Q96DI7 357 aaKnown RBP15.21■□□□□ 0.03
LRP3-201ENST00000253193 PYGO2Q9BRQ0 406 aa15.21■□□□□ 0.03
LRP3-201ENST00000253193 SNHG12Q9BXW3 62 aa15.21■□□□□ 0.03
LRP3-201ENST00000253193 TUBG2Q9NRH3 451 aa15.21■□□□□ 0.03
LRP3-201ENST00000253193 YTHDF2Q9Y5A9 579 aaKnown RBP15.21■□□□□ 0.03
LRP3-201ENST00000253193 TNRC18O15417 2968 aaPredicted RBP15.21■□□□□ 0.03
LRP3-201ENST00000253193 APOA2P02652 100 aa15.21■□□□□ 0.02
LRP3-201ENST00000253193 STAG3L2P0CL84 134 aa15.21■□□□□ 0.02
LRP3-201ENST00000253193 STAG3L3P0CL85 134 aa15.21■□□□□ 0.02
LRP3-201ENST00000253193 OR8I2Q8N0Y5 310 aa15.21■□□□□ 0.02
LRP3-201ENST00000253193 SLC25A15Q9Y619 301 aa15.21■□□□□ 0.02
LRP3-201ENST00000253193 KBTBD11-OT1A0A1B0GTJ5 212 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 PAX1P15863 534 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 PQLC2Q6ZP29 291 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 RNASEH2CQ8TDP1 164 aaKnown RBP15.2■□□□□ 0.02
LRP3-201ENST00000253193 SLC45A2Q9UMX9 530 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 BOD1L1Q8NFC6 3051 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 GGCTO75223 188 aaKnown RBP15.2■□□□□ 0.02
LRP3-201ENST00000253193 TNFSF13O75888 250 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 OR5G3P0C626 314 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 APELAP0DMC3 54 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 RPL29P47914 159 aaKnown RBP15.2■□□□□ 0.02
LRP3-201ENST00000253193 LCN2P80188 198 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 MLANAQ16655 118 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 MSMPQ1L6U9 139 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 PRR27Q6MZM9 219 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 NHLRC2Q8NBF2 726 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 Q8TCH9 128 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 C15orf61A6NNL5 157 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 GCGP01275 180 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 CCKARP32238 428 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 GLRXP35754 106 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 KIAA1644Q3SXP7 199 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 HARBI1Q96MB7 349 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 NABP2Q9BQ15 211 aa15.2■□□□□ 0.02
LRP3-201ENST00000253193 ARSJQ5FYB0 599 aaPredicted RBP15.19■□□□□ 0.02
LRP3-201ENST00000253193 ACTL10Q5JWF8 245 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 SLC35E1Q96K37 410 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 PRNDQ9UKY0 176 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 APC2O95996 2303 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 STUMQ69YW2 141 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 MRPL54Q6P161 138 aaKnown RBP15.19■□□□□ 0.02
LRP3-201ENST00000253193 FAM90A1Q86YD7 464 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 NKX6-3A6NJ46 265 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 TIMP3P35625 211 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 TAS2R45P59539 299 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 ERHP84090 104 aaKnown RBP15.19■□□□□ 0.02
LRP3-201ENST00000253193 RPEL1Q2QD12 228 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 DCAF16Q9NXF7 216 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 ABCA4P78363 2273 aa15.19■□□□□ 0.02
LRP3-201ENST00000253193 ADMP35318 185 aa15.18■□□□□ 0.02
LRP3-201ENST00000253193 VDAC2P45880 294 aaPredicted RBP15.18■□□□□ 0.02
LRP3-201ENST00000253193 KRTDAPP60985 99 aa15.18■□□□□ 0.02
LRP3-201ENST00000253193 DNLZQ5SXM8 178 aa15.18■□□□□ 0.02
LRP3-201ENST00000253193 RBMXL3Q8N7X1 1067 aaKnown RBP15.18■□□□□ 0.02
LRP3-201ENST00000253193 ADTRPQ96IZ2 230 aa15.18■□□□□ 0.02
LRP3-201ENST00000253193 hADV38S2A0JD32 116 aa15.18■□□□□ 0.02
LRP3-201ENST00000253193 CHRNB4P30926 498 aa15.18■□□□□ 0.02
LRP3-201ENST00000253193 NUTF2P61970 127 aaKnown RBP15.18■□□□□ 0.02
LRP3-201ENST00000253193 TBX15Q96SF7 602 aa15.18■□□□□ 0.02
LRP3-201ENST00000253193 MRPL18Q9H0U6 180 aaKnown RBP15.18■□□□□ 0.02
LRP3-201ENST00000253193 TECRQ9NZ01 308 aaKnown RBP15.18■□□□□ 0.02
LRP3-201ENST00000253193 IGKV1-16P04430 117 aa15.18■□□□□ 0.02
LRP3-201ENST00000253193 ZNF474Q6S9Z5 364 aaPredicted RBP15.18■□□□□ 0.02
LRP3-201ENST00000253193 NOL4LQ96MY1 436 aaPredicted RBP15.18■□□□□ 0.02
LRP3-201ENST00000253193 KLK10O43240 276 aa15.17■□□□□ 0.02
LRP3-201ENST00000253193 EIF4EBP1Q13541 118 aaPredicted RBP15.17■□□□□ 0.02
LRP3-201ENST00000253193 TDRG1Q3Y452 100 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms