RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 FOXL1Q12952 345 aa17.96■□□□□ 0.47
SMARCD2-201ENST00000225742 FAM71F2Q6NXP2 309 aa17.96■□□□□ 0.47
SMARCD2-201ENST00000225742 OR1L8Q8NGR8 309 aa17.96■□□□□ 0.47
SMARCD2-201ENST00000225742 C11orf52Q96A22 123 aa17.96■□□□□ 0.47
SMARCD2-201ENST00000225742 C19orf24Q9BVV8 132 aa17.96■□□□□ 0.47
SMARCD2-201ENST00000225742 SLC45A2Q9UMX9 530 aa17.96■□□□□ 0.47
SMARCD2-201ENST00000225742 TEX50A0A1B0GTY4 177 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 AREGP15514 252 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 PNKDQ8N490 385 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 C8orf31Q8N9H6 132 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 OR1P1Q8NH06 330 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 UHRF2Q96PU4 802 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 PFDN5Q99471 154 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 HINT2Q9BX68 163 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 LY96Q9Y6Y9 160 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 MDFIC2A0A1B0GVS7 189 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 LINC00869P0C866 280 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 CHRNA7P36544 502 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 RPL31P62899 125 aaKnown RBP17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 CCL8P80075 99 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 ZNF714Q96N38 554 aa17.95■□□□□ 0.46
SMARCD2-201ENST00000225742 INS-IGF2F8WCM5 200 aa17.94■□□□□ 0.46
SMARCD2-201ENST00000225742 FABP4P15090 132 aa17.94■□□□□ 0.46
SMARCD2-201ENST00000225742 PDLIM4P50479 330 aa17.94■□□□□ 0.46
SMARCD2-201ENST00000225742 PRSS33Q8NF86 280 aa17.94■□□□□ 0.46
SMARCD2-201ENST00000225742 OR4A5Q8NH83 315 aa17.94■□□□□ 0.46
SMARCD2-201ENST00000225742 HIST1H2BLQ99880 126 aa17.94■□□□□ 0.46
SMARCD2-201ENST00000225742 PPIAL4EA0A075B759 164 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 PPIAL4DF5H284 164 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 PPIAL4FP0DN26 164 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 IGFBP2P18065 325 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 TMEM177Q53S58 311 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 RNASEH2CQ8TDP1 164 aaKnown RBP17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 SFRP2Q96HF1 295 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 DCAF16Q9NXF7 216 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 PPIAL4AQ9Y536 164 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 YTHDF2Q9Y5A9 579 aaKnown RBP17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 SRRM4A7MD48 611 aaKnown RBP17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 TMEM178BH3BS89 294 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 THBDP07204 575 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 NBL1P41271 181 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 BSPH1Q075Z2 132 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 PDZD11Q5EBL8 140 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 LINC00311Q8N616 119 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 OR5T1Q8NG75 326 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 OR5AN1Q8NGI8 311 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 ZNF596Q8TC21 504 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 PACRGQ96M98 296 aaPredicted RBP17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 DERL1Q9BUN8 251 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 SEPSECSQ9HD40 501 aaKnown RBP17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 TMEM167BQ9NRX6 74 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 FUT9Q9Y231 359 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 ZNF835Q9Y2P0 537 aa17.93■□□□□ 0.46
SMARCD2-201ENST00000225742 EP300Q09472 2414 aaPredicted RBP17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 TRAV9-1A0A075B6T8 112 aa17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 C9JCJ5 164 aa17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 IGKV1-16P04430 117 aa17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 SAA1P0DJI8 122 aaPredicted RBP17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 HIST1H1BP16401 226 aaKnown RBP17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 SSX2Q16385 188 aa17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 FAM78BQ5VT40 261 aa17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 ASCL5Q7RTU5 278 aa17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 SAP30LQ9HAJ7 183 aa17.92■□□□□ 0.46
SMARCD2-201ENST00000225742 SCO2A0A1W2PP80 73 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 XKRY2A2RUG3 117 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 DVL1O14640 695 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 TNFRSF13BO14836 293 aaPredicted RBP17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 MYOD1P15172 320 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 GPX4P36969 197 aaPredicted RBP17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 CACNG8Q8WXS5 425 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 MRPL20Q9BYC9 149 aaKnown RBP17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 TECRQ9NZ01 308 aaKnown RBP17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 H0YJW9 148 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 RNASE2P10153 161 aaKnown RBP17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 IL3RAP26951 378 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 SPATA31B1PQ5VZV4 182 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 TMEM200BQ69YZ2 307 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 GFRALQ6UXV0 394 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 OR4P4Q8NGL7 312 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 SNRNP40Q96DI7 357 aaKnown RBP17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 ABHD17AQ96GS6 310 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 NGBQ9NPG2 151 aa17.91■□□□□ 0.46
SMARCD2-201ENST00000225742 NDUFB3O43676 98 aa17.9■□□□□ 0.46
SMARCD2-201ENST00000225742 C1QTNF9P0C862 333 aa17.9■□□□□ 0.46
SMARCD2-201ENST00000225742 USF1P22415 310 aaPredicted RBP17.9■□□□□ 0.46
SMARCD2-201ENST00000225742 LRRC10Q5BKY1 277 aa17.9■□□□□ 0.46
SMARCD2-201ENST00000225742 OR10G8Q8NGN5 311 aa17.9■□□□□ 0.46
SMARCD2-201ENST00000225742 VSTM2AQ8TAG5 236 aa17.9■□□□□ 0.46
SMARCD2-201ENST00000225742 TMEM186Q96B77 213 aa17.9■□□□□ 0.46
SMARCD2-201ENST00000225742 NABP2Q9BQ15 211 aa17.9■□□□□ 0.46
SMARCD2-201ENST00000225742 A0A1W2PN81 502 aa17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 ERHP84090 104 aaKnown RBP17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 CD69Q07108 199 aa17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 PDPNQ86YL7 162 aa17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 ZNF114Q8NC26 417 aa17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 OR5R1Q8NH85 324 aa17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 HARBI1Q96MB7 349 aa17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 RNF2Q99496 336 aa17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 LRFN3Q9BTN0 628 aa17.89■□□□□ 0.45
SMARCD2-201ENST00000225742 COMMD5Q9GZQ3 224 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms