RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 IGKV1D-39P04432 117 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 AREGP15514 252 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 KLF9Q13886 244 aaPredicted RBP13.41□□□□□ -0.26
MRPL28-201ENST00000199706 FAAP20Q6NZ36 180 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 OR51S1Q8NGJ8 323 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 OR6Q1Q8NGQ2 317 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 NDUFA4L2Q9NRX3 87 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 GPR132Q9UNW8 380 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 IGLV11-55A0A075B6I3 123 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 SEC14L6B5MCN3 397 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 CYB5BO43169 146 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 RBMXL2O75526 392 aaKnown RBP13.4□□□□□ -0.26
MRPL28-201ENST00000199706 P0C879 139 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 TRAPPC2P0DI81 140 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 TRAPPC2BP0DI82 140 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 PI3P19957 117 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 HOXD3P31249 432 aaPredicted RBP13.4□□□□□ -0.26
MRPL28-201ENST00000199706 ATP5G2Q06055 141 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 PYDC2Q56P42 97 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 ZNF429Q86V71 674 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 LSM10Q969L4 123 aaKnown RBP13.4□□□□□ -0.26
MRPL28-201ENST00000199706 FANCD2OSQ96PS1 177 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 TP53RKQ96S44 253 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 RTBDNQ9BSG5 229 aaPredicted RBP13.4□□□□□ -0.26
MRPL28-201ENST00000199706 C5orf66Q9H5L9 145 aa13.4□□□□□ -0.26
MRPL28-201ENST00000199706 PEF1Q9UBV8 284 aaKnown RBP13.4□□□□□ -0.26
MRPL28-201ENST00000199706 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.39□□□□□ -0.27
MRPL28-201ENST00000199706 TEX50A0A1B0GTY4 177 aa13.39□□□□□ -0.27
MRPL28-201ENST00000199706 EXOSC2Q13868 293 aaKnown RBP13.39□□□□□ -0.27
MRPL28-201ENST00000199706 C15orf32Q32M92 178 aa13.39□□□□□ -0.27
MRPL28-201ENST00000199706 H2BFWTQ7Z2G1 175 aa13.39□□□□□ -0.27
MRPL28-201ENST00000199706 DCUN1D4Q92564 292 aa13.39□□□□□ -0.27
MRPL28-201ENST00000199706 DLX4Q92988 240 aaPredicted RBP13.39□□□□□ -0.27
MRPL28-201ENST00000199706 SRRQ9GZT4 340 aa13.39□□□□□ -0.27
MRPL28-201ENST00000199706 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
MRPL28-201ENST00000199706 NAA60Q9H7X0 242 aa13.39□□□□□ -0.27
MRPL28-201ENST00000199706 AURKAIP1Q9NWT8 199 aaPredicted RBP13.39□□□□□ -0.27
MRPL28-201ENST00000199706 OR51B2Q9Y5P1 312 aa13.39□□□□□ -0.27
MRPL28-201ENST00000199706 SORL1Q92673 2214 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 CRYM-AS1A6NIL9 109 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 MYOD1P15172 320 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 SLURP1P55000 103 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 ACSM6Q6P461 480 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 LINC00299Q6ZSB3 139 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 FAM219AQ8IW50 185 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 TOMM5Q8N4H5 51 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 OR1L6Q8NGR2 347 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 GALNT14Q96FL9 552 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 TMEM56Q96MV1 263 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 ATP6V0BQ99437 205 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 THYN1Q9P016 225 aa13.38□□□□□ -0.27
MRPL28-201ENST00000199706 PIGBOS1A0A0B4J2F0 54 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 CDS2O95674 445 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 PRH1P02810 166 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 DHODHQ02127 395 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 WT1-ASQ06250 92 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 DCTN2Q13561 401 aaKnown RBP13.37□□□□□ -0.27
MRPL28-201ENST00000199706 KLF5Q13887 457 aaPredicted RBP13.37□□□□□ -0.27
MRPL28-201ENST00000199706 AARDQ4LEZ3 155 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 OR4A16Q8NH70 328 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 CXorf58Q96LI9 332 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 MCUBQ9NWR8 336 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 FBXL7Q9UJT9 491 aa13.37□□□□□ -0.27
MRPL28-201ENST00000199706 INS-IGF2F8WCM5 200 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 OR2J3O76001 311 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 IGKV1-5P01602 117 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 DEFA4P12838 97 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 AKR1C2P52895 323 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 KRTAP10-11P60412 298 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 PRCDQ00LT1 54 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 ZNF114Q8NC26 417 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 IL22RA2Q969J5 263 aa13.36□□□□□ -0.27
MRPL28-201ENST00000199706 SLC25A21Q9BQT8 299 aaPredicted RBP13.36□□□□□ -0.27
MRPL28-201ENST00000199706 TRBV7-1A0A0A6YYK4 115 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 TEX13DA0A0J9YY54 714 aaPredicted RBP13.35□□□□□ -0.27
MRPL28-201ENST00000199706 OR5AC1P0C628 307 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 OR13C7P0DN81 318 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 HSPE1P61604 102 aaKnown RBP13.35□□□□□ -0.27
MRPL28-201ENST00000199706 TRIM16LQ309B1 348 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 OR10W1Q8NGF6 305 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 VN1R17PQ8TDU5 208 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 RBPMSQ93062 196 aaKnown RBP13.35□□□□□ -0.27
MRPL28-201ENST00000199706 EEF1AKMT3Q96AZ1 226 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 ELOVL1Q9BW60 279 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 SIGLEC8Q9NYZ4 499 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 CACFD1Q9UGQ2 172 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 NSG2Q9Y328 171 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 F11RQ9Y624 299 aaKnown RBP13.35□□□□□ -0.27
MRPL28-201ENST00000199706 TMEM56-RWDD3S4R434 201 aa13.35□□□□□ -0.27
MRPL28-201ENST00000199706 ANKRD34BA5PLL1 514 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 DBX1A6NMT0 343 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 BMPR1BO00238 502 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 DEFA5Q01523 94 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 TATDN3Q17R31 274 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 RPEL1Q2QD12 228 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 SGPP2Q8IWX5 399 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 OR1P1Q8NH06 330 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 RRNAD1Q96FB5 475 aaKnown RBP13.34□□□□□ -0.27
MRPL28-201ENST00000199706 CCDC140Q96MF4 163 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms