RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 LSM5Q9Y4Y9 91 aaKnown RBP4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 FAM90A9PA6NNJ1 464 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 G3V318 75 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 L7N2F9 121 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 UPK2O00526 184 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 ATP6V0E1O15342 81 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 RBFOX2O43251 390 aaKnown RBP eCLIP4.61□□□□□ -1.673e-8■■□□□ 11.7
HNRNPU-220ENST00000639667 FGF16O43320 207 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 SPDEFO95238 335 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 SIX6O95475 246 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 OR9G9P0C7N8 305 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 SULT1A3P0DMM9 295 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 SULT1A4P0DMN0 295 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 HLA-GP17693 338 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 BTCP35070 178 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 VAMP2P63027 116 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 IAH1Q2TAA2 248 aaPredicted RBP4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 ANKRD55Q3KP44 614 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 ZNF585BQ52M93 769 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 GSG1LQ6UXU4 331 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 PRIMA1Q86XR5 153 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 FAM219AQ8IW50 185 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 SRSF12Q8WXF0 261 aaKnown RBP4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 GPR146Q96CH1 333 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 HSPB9Q9BQS6 159 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 MAGT1Q9H0U3 335 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 PLEKHA3Q9HB20 300 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 PRNDQ9UKY0 176 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 IGHV3-21A0A0B4J1V1 117 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 TRAV41A0A0B4J266 112 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 PIGBOS1A0A0B4J2F0 54 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 LINC01548A6NM66 108 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 IFNA10P01566 189 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 IAPPP10997 89 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 UCP1P25874 307 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 GGNBP1Q5YKI7 109 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 LCNL1Q6ZST4 164 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 OR4X2Q8NGF9 303 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 PINX1Q96BK5 328 aaKnown RBP4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 TMEM56Q96MV1 263 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 MGAT4CQ9UBM8 478 aa4.61□□□□□ -1.67
HNRNPU-220ENST00000639667 TCRBV4S1A1TA0A5B7 111 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 CLPSL1A2RUU4 121 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 TRAPPC2P0DI81 140 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 TRAPPC2BP0DI82 140 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 ERHP84090 104 aaKnown RBP4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 KRTAP24-1Q3LI83 254 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 CXorf66Q5JRM2 361 aaPredicted RBP4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 OR5AU1Q8NGC0 362 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 DDB2Q92466 427 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 NEURL2Q9BR09 285 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 QTRT1Q9BXR0 403 aaKnown RBP4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 FKBP11Q9NYL4 201 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 PRAF2O60831 178 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 ATP6V1G1O75348 118 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 B3GALNT1O75752 331 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 PRH1P02810 166 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 DEFA5Q01523 94 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 SMCO1Q147U7 214 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 NDUFA5Q16718 116 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 TATDN3Q17R31 274 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 UBAC2Q8NBM4 344 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 GON7Q9BXV9 100 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 MMP24Q9Y5R2 645 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 A0A0B4J2A0 478 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 CYB5BO43169 146 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 IGHV3-11P01762 117 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 TRGV3P03979 118 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 FGF2P09038 288 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 TPPP2P59282 170 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 EBI3Q14213 229 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 NPBQ8NG41 125 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 LHFPL5Q8TAF8 219 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 TMEM167AQ8TBQ9 72 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 MISP3Q96FF7 219 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 HIPK2Q9H2X6 1198 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 SHPKQ9UHJ6 478 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 ALG5Q9Y673 324 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 S4R3C0 116 aa4.6□□□□□ -1.67
HNRNPU-220ENST00000639667 BOLA2-SMG1P6H3BVE0 249 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 CLDN34H7C241 214 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 DUS4LO95620 317 aaKnown RBP4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 HLA-DRB1P01911 266 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 IFNA4P05014 189 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 ZNF562Q6V9R5 426 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 AKAP14Q86UN6 197 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 OR10W1Q8NGF6 305 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 LINC01006Q8NI28 216 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 DPF1Q92782 380 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 PRDM13Q9H4Q3 707 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 ZNF702PQ9H963 129 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 GNB4Q9HAV0 340 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 PLSCR3Q9NRY6 295 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 BET1LQ9NYM9 111 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 TMED3Q9Y3Q3 217 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 ATRQ13535 2644 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 PLXNB1O43157 2135 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 IGHV7-81A0A0B4J1V7 117 aa4.59□□□□□ -1.67
HNRNPU-220ENST00000639667 FBXO24O75426 580 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms