RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CHD8Q9HCK8 2581 aa16.1■□□□□ 0.17
PCDHB11-202ENST00000624887 MPDU1O75352 247 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 RAB11AP62491 216 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 HABP2Q14520 560 aaPredicted RBP16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 MUC15Q8N387 334 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 ZNF596Q8TC21 504 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 VAX2Q9UIW0 290 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 SRRM4A7MD48 611 aaKnown RBP16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 UPK2O00526 184 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 UBE2CO00762 179 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 EIF3GO75821 320 aaKnown RBP eCLIP16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 IFNA1P01562 189 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 DLX6P56179 175 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 DLK1P80370 383 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 LINC00311Q8N616 119 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 P2RX4Q99571 388 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 MRPL20Q9BYC9 149 aaKnown RBP16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 ACTR3CQ9C0K3 210 aaPredicted RBP16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 SLC25A22Q9H936 323 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 ZNF257Q9Y2Q1 563 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 OR51B2Q9Y5P1 312 aa16.09■□□□□ 0.17
PCDHB11-202ENST00000624887 CDSNQ15517 529 aa16.08■□□□□ 0.16
PCDHB11-202ENST00000624887 ZNF672Q499Z4 452 aaPredicted RBP16.08■□□□□ 0.16
PCDHB11-202ENST00000624887 TMEM155Q4W5P6 130 aa16.08■□□□□ 0.16
PCDHB11-202ENST00000624887 CA5BP1Q8WTZ4 195 aa16.08■□□□□ 0.16
PCDHB11-202ENST00000624887 ENY2Q9NPA8 101 aa16.08■□□□□ 0.16
PCDHB11-202ENST00000624887 C5orf52A6NGY3 159 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 SOX15O60248 233 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 ACOT6Q3I5F7 207 aaPredicted RBP16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 FAM71F2Q6NXP2 309 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 TREML4Q6UXN2 200 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 RBMS3Q6XE24 437 aaKnown RBP16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 SLC24A4Q8NFF2 622 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 OR5AN1Q8NGI8 311 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 OSR1Q8TAX0 266 aaPredicted RBP16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 NIPSNAP3BQ9BS92 247 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 BET1LQ9NYM9 111 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 H0YJW9 148 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 J3QR06 171 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 APOA2P02652 100 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 NPY1RP25929 384 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 FAM90A2PQ658T7 463 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 OR10X1Q8NGY0 326 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 TCEAL7Q9BRU2 100 aa16.07■□□□□ 0.16
PCDHB11-202ENST00000624887 A0A087X0M5 115 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 A0A1B0GX30 115 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 SMCO3A2RU48 225 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 FSTL3O95633 263 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 SLC35E3Q7Z769 313 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 RAB24Q969Q5 203 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 HIST1H2BAQ96A08 127 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 TMEM186Q96B77 213 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 ANKHD1Q8IWZ3 2542 aaKnown RBP16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 C1orf196B1AJZ1 125 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 CYB5BO43169 146 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 KBTBD11O94819 623 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 MYOD1P15172 320 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 PRCDQ00LT1 54 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 C2CD4CQ8TF44 421 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 ISOC2Q96AB3 205 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 TVP23CQ96ET8 276 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 TMEM204Q9BSN7 226 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 FKBP11Q9NYL4 201 aa16.06■□□□□ 0.16
PCDHB11-202ENST00000624887 TRBV23-1A0A0A0MS06 115 aa16.05■□□□□ 0.16
PCDHB11-202ENST00000624887 HMGB3O15347 200 aaKnown RBP16.05■□□□□ 0.16
PCDHB11-202ENST00000624887 MT-ND4LP03901 98 aa16.05■□□□□ 0.16
PCDHB11-202ENST00000624887 SAA1P0DJI8 122 aaPredicted RBP16.05■□□□□ 0.16
PCDHB11-202ENST00000624887 OPRK1P41145 380 aa16.05■□□□□ 0.16
PCDHB11-202ENST00000624887 ST6GALNAC6Q969X2 333 aa16.05■□□□□ 0.16
PCDHB11-202ENST00000624887 SEC14L6B5MCN3 397 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 CA2P00918 260 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 AGAP20933 346 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 COL8A2P25067 703 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 ZNF137PP52743 207 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 TMEM177Q53S58 311 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 OR9G1Q8NH87 305 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 PLEKHA3Q9HB20 300 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 NPVFQ9HCQ7 196 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 A0A1W2PPE2 198 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 IGHV1-8P0DP01 117 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 TAGLN2P37802 199 aaKnown RBP16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 PPOXP50336 477 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 C11orf42Q8N5U0 333 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 HARBI1Q96MB7 349 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 MGST2Q99735 147 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 NABP2Q9BQ15 211 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 HINT2Q9BX68 163 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 TMPRSS5Q9H3S3 457 aa16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 METTL1Q9UBP6 276 aaKnown RBP16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 LSM4Q9Y4Z0 139 aaKnown RBP16.04■□□□□ 0.16
PCDHB11-202ENST00000624887 A0A087WWC5 75 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 TEX50A0A1B0GTY4 177 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 A0A1W2PPH5 198 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 LYNX1G3V0Z9 82 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 S100A9P06702 114 aaKnown RBP16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 LYNX1P0DP58 116 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 REG1BP48304 166 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 CDC34P49427 236 aaPredicted RBP16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 MEF2BQ02080 365 aaPredicted RBP16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 ZFP82Q8N141 532 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms