RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PUSL1Q8N0Z8 303 aaKnown RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 TMEM217Q8N7C4 229 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 OR4A5Q8NH83 315 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 VSTM2AQ8TAG5 236 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 LRRC20Q8TCA0 184 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 CLCC1Q96S66 551 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 MS4A7Q9GZW8 240 aaPredicted RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 SIRPDQ9H106 197 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 HIPK2Q9H2X6 1198 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 ZNF257Q9Y2Q1 563 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 STRAPQ9Y3F4 350 aaKnown RBP7.2□□□□□ -1.26
CCDC47-207ENST00000612558 DOPEY2Q9Y3R5 2298 aa7.2□□□□□ -1.26
CCDC47-207ENST00000612558 TACC2O95359 2948 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 IGHV4-30-2A0A087WSY4 118 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 IGHV4-61A0A0C4DH41 118 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 FAM157AC9JC47 383 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 KBTBD11O94819 623 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 TOX4O94842 621 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 NMBP08949 121 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 FGF2P09038 288 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 METTL15P1P0C7V9 234 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 DVL1P1P54792 670 aaPredicted RBP7.19□□□□□ -1.26
CCDC47-207ENST00000612558 RPP30P78346 268 aaKnown RBP7.19□□□□□ -1.26
CCDC47-207ENST00000612558 CLINT1Q14677 625 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 SPINK9Q5DT21 86 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 FAM74A1Q5RGS3 127 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 CRYBG3Q68DQ2 2970 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 PDZD9Q8IXQ8 264 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 STPG2Q8N412 459 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 TMEM167AQ8TBQ9 72 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 RNF141Q8WVD5 230 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 PCNPQ8WW12 178 aaKnown RBP7.19□□□□□ -1.26
CCDC47-207ENST00000612558 TMED6Q8WW62 240 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 RBMXL1Q96E39 390 aaKnown RBP7.19□□□□□ -1.26
CCDC47-207ENST00000612558 TSNAXQ99598 290 aaKnown RBP7.19□□□□□ -1.26
CCDC47-207ENST00000612558 ATP5SQ99766 215 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 RNF5Q99942 180 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 GINS3Q9BRX5 216 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 TCF19Q9Y242 345 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 OR51B2Q9Y5P1 312 aa7.19□□□□□ -1.26
CCDC47-207ENST00000612558 IGHV3-72A0A0B4J1Y9 119 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 RNASEK-C17orf49H0YIS7 233 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 FBXO24O75426 580 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 SCAF4O95104 1147 aaKnown RBP7.18□□□□□ -1.26
CCDC47-207ENST00000612558 IGLV2-23P01705 113 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 SEC11BP0C7V7 166 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 USF1P22415 310 aaPredicted RBP7.18□□□□□ -1.26
CCDC47-207ENST00000612558 VDAC2P45880 294 aaPredicted RBP7.18□□□□□ -1.26
CCDC47-207ENST00000612558 LGALS4P56470 323 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 KLRD1Q13241 179 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 VMA21Q3ZAQ7 101 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 LDLRAD2Q5SZI1 272 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 MINOS1Q5TGZ0 78 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 OR5B3Q8NH48 314 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 OR4C12Q96R67 309 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 ENY2Q9NPA8 101 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 HEYLQ9NQ87 328 aaPredicted RBP7.18□□□□□ -1.26
CCDC47-207ENST00000612558 MINOS1-NBL1R4GNA1 71 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 CENPEQ02224 2701 aa7.18□□□□□ -1.26
CCDC47-207ENST00000612558 ANKRD17O75179 2603 aaKnown RBP7.18□□□□□ -1.26
CCDC47-207ENST00000612558 TEX50A0A1B0GTY4 177 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 A0A1W2PPI3 338 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 OOSP1A8MZH6 123 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 IFNA5P01569 189 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 FAM157CP0CG43 387 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 SPP1P10451 314 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 SLC25A16P16260 332 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 CD1BP29016 333 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 HOXA1P49639 335 aaPredicted RBP7.17□□□□□ -1.26
CCDC47-207ENST00000612558 UBE2E1P51965 193 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 RPL8P62917 257 aaKnown RBP7.17□□□□□ -1.26
CCDC47-207ENST00000612558 PRCDQ00LT1 54 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 PAX8Q06710 450 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 SLC38A11Q08AI6 406 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 ARL16Q0P5N6 197 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 ATP6V1FQ16864 119 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 CLEC12BQ2HXU8 276 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 CCDC144NLQ6NUI1 221 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 HAPLN4Q86UW8 402 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 LILRB2Q8N423 598 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 TEX45Q8NA69 505 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 HSD17B11Q8NBQ5 300 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 OR10P1Q8NGE3 313 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 PINX1Q96BK5 328 aaKnown RBP7.17□□□□□ -1.26
CCDC47-207ENST00000612558 RITA1Q96K30 269 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 TBX15Q96SF7 602 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 MED9Q9NWA0 146 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 BEX4Q9NWD9 120 aaPredicted RBP7.17□□□□□ -1.26
CCDC47-207ENST00000612558 HILPDAQ9Y5L2 63 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 AUP1Q9Y679 476 aa7.17□□□□□ -1.26
CCDC47-207ENST00000612558 C15orf62A8K5M9 175 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 PMS2P5A8MQ11 134 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 TIMM23O14925 209 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 FGF16O43320 207 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 SLC25A17O43808 307 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 IFNA10P01566 189 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 SULT1A2P50226 295 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 KRTAP10-9P60411 292 aa7.16□□□□□ -1.26
CCDC47-207ENST00000612558 HABP2Q14520 560 aaPredicted RBP7.16□□□□□ -1.26
CCDC47-207ENST00000612558 OR8G2PQ6IF36 304 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms