RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ZMAT4Q9H898 229 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 ZNF430Q9H8G1 570 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 PLEKHA2Q9HB19 425 aa13.49□□□□□ -0.25
SHKBP1-203ENST00000594298 MSGN1A6NI15 193 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 DISC1C4P0D8 188 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 MPPED1O15442 326 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 KBTBD11O94819 623 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 LYL1P12980 280 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 PGAM2P15259 253 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 ERVK-16P61578 105 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 VKORC1L1Q8N0U8 176 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 ZFAND1Q8TCF1 268 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 SRSF12Q8WXF0 261 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 SOSTQ9BQB4 213 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 ZNF355PQ9NSJ1 428 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 FAM212BQ9NTI7 297 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 BET1LQ9NYM9 111 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 COMMD9Q9P000 198 aa13.48□□□□□ -0.25
SHKBP1-203ENST00000594298 SACSQ9NZJ4 4579 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 HSPB1P04792 205 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 AKAIN1P0CW23 69 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 SSBP2P81877 361 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 MRGPRG-AS1Q2M3A8 158 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 PHLDA2Q53GA4 152 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 SSX9Q7RTT3 188 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 OR5T1Q8NG75 326 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 TERB2Q8NHR7 220 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 CASTOR1Q8WTX7 329 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 CITED4Q96RK1 184 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 HRASLSQ9HDD0 168 aa13.47□□□□□ -0.25
SHKBP1-203ENST00000594298 BRI3O95415 125 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 PTBP1P26599 531 aaKnown RBP eCLIP13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 LPAR6P43657 344 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 RPL8P62917 257 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 POU2AF1Q16633 256 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 SCGB2B2Q4G0G5 96 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 OR4A47Q6IF82 309 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 SLC25A42Q86VD7 318 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 LHFPL1Q86WI0 220 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 DMBX1Q8NFW5 382 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 OR4C12Q96R67 309 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 TM2D3Q9BRN9 247 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 DNAH7Q8WXX0 4024 aa13.46□□□□□ -0.25
SHKBP1-203ENST00000594298 A0A0G2JLM5 398 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 A8MZ25 164 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 S1PR2O95136 353 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 TRGV3P03979 118 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 RPL27AP46776 148 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 TPPP2P59282 170 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 PYDC2Q56P42 97 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 TBC1D26Q86UD7 250 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 MS4A10Q96PG2 267 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 THAP7Q9BT49 309 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 COA4Q9NYJ1 87 aa13.45□□□□□ -0.26
SHKBP1-203ENST00000594298 LCE6AA0A183 80 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 FGF2P09038 288 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 OR9G9P0C7N8 305 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 HLA-GP17693 338 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 RND3P61587 244 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 SPANXN2Q5MJ10 180 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 CADM3Q8N126 398 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 Q8N1Y9 231 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 CCDC71LQ8N9Z2 235 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 OR4D10Q8NGI6 311 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 PRRT1Q99946 306 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 PALMDQ9NP74 551 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 SLC2A9Q9NRM0 540 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 COPZ2Q9P299 210 aa13.44□□□□□ -0.26
SHKBP1-203ENST00000594298 SORL1Q92673 2214 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 C13orf42A0A1B0GVH6 325 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 ANKRD20A5PA0PJZ0 165 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 DPPA5A6NC42 116 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 MARCH11A6NNE9 402 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 UPK2O00526 184 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 IGLV1-51P01701 117 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 IGHV3-11P01762 117 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 IGHV4-30-4P0DP06 118 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 PPP5CP53041 499 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 AP3S2P59780 193 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 SURF2Q15527 256 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 TTC9CQ8N5M4 171 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 FYTTD1Q96QD9 318 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 ELOVL1Q9BW60 279 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 COMMD5Q9GZQ3 224 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 TMEM140Q9NV12 185 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 C19orf73Q9NVV2 129 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 SCP2D1Q9UJQ7 156 aa13.43□□□□□ -0.26
SHKBP1-203ENST00000594298 TENM2Q9NT68 2774 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 B3GALNT1O75752 331 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 SNAPC5O75971 98 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 SERPINE2P07093 398 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 CTSDP07339 412 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 IL6RP08887 468 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 ZNF735P0CB33 412 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 RPA2P15927 270 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 FAUP35544 74 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 PIGPP57054 158 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 CCDC190Q86UF4 302 aa13.42□□□□□ -0.26
SHKBP1-203ENST00000594298 Q8N402 240 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms