RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 C1QBP02746 253 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 PPBPP02775 128 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 METTL15P1P0C7V9 234 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 PGA5P0DJD9 388 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 IGHV4-38-2P0DP08 117 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 PSG2P11465 335 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 FOLR2P14207 255 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 GATA1P15976 413 aaPredicted RBP3.76□□□□□ -1.81
ZNF540-204ENST00000586792 AKR1D1P51857 326 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 CAV3P56539 151 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 EDDM3BP56851 147 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 TAS2R43P59537 309 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 RPS20P60866 119 aaKnown RBP3.76□□□□□ -1.81
ZNF540-204ENST00000586792 ISL1P61371 349 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 ERVK11-1P61568 191 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 PPP3R1P63098 170 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 TPBGQ13641 420 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 BSXQ3C1V8 233 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 SPIN3Q5JUX0 258 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 TMEM42Q69YG0 159 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 BRD3OSQ6XYD6 125 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 ACP7Q6ZNF0 438 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 SLC25A26Q70HW3 274 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 VMO1Q7Z5L0 202 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 C11orf53Q8IXP5 236 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 KIR3DL3Q8N743 410 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.76□□□□□ -1.81
ZNF540-204ENST00000586792 C3orf56Q8N813 242 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 ZNRF1Q8ND25 227 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 OR1B1Q8NGR6 318 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 CNIH3Q8TBE1 160 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 SFT2D1Q8WV19 159 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 TCTEX1D2Q8WW35 142 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 APH1BQ8WW43 257 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 PTH2Q96A98 100 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 CREB3L1Q96BA8 519 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 FGGYQ96C11 551 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 SEH1LQ96EE3 360 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 ZNF488Q96MN9 340 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 GAFA1Q96PS6 74 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 PFDN5Q99471 154 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 ELL3Q9HB65 397 aaPredicted RBP3.76□□□□□ -1.81
ZNF540-204ENST00000586792 SCN3BQ9NY72 215 aa3.76□□□□□ -1.81
ZNF540-204ENST00000586792 EXOSC1Q9Y3B2 195 aaKnown RBP3.76□□□□□ -1.81
ZNF540-204ENST00000586792 AK6Q9Y3D8 172 aaKnown RBP3.76□□□□□ -1.81
ZNF540-204ENST00000586792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.76□□□□□ -1.81
ZNF540-204ENST00000586792 ZFHX3Q15911 3703 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 ABCA2Q9BZC7 2435 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 MALRD1Q5VYJ5 2156 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 IGKV1D-17A0A075B6S4 117 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 IGHV1-69DA0A0B4J2H0 117 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 A0A1W2PP11 408 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 MEIOCA2RUB1 952 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 J3QRE1 110 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 M0R1W7 72 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 NUPL2O15504 423 aaKnown RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 ANGPTL7O43827 346 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 UPK1BO75841 260 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 CLIC3O95833 236 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 CA1P00915 261 aaPredicted RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 IGHV1-69P01742 117 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 ORM1P02763 201 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 PIPP12273 146 aaPredicted RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 ATF1P18846 271 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 PRTN3P24158 256 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 TNFSF8P32971 234 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 GPX4P36969 197 aaPredicted RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 RAG2P55895 527 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 RAB2AP61019 212 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 RAB5BP61020 215 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 UBE2MP61081 183 aaKnown RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 NUTF2P61970 127 aaKnown RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 RPL31P62899 125 aaKnown RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 UBA52P62987 128 aaKnown RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 AESQ08117 197 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 EDDM3AQ14507 147 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 ARL6IP1Q15041 203 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 SLC9A3R2Q15599 337 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 UBE2V2Q15819 145 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 RPEL1Q2QD12 228 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 LRRC37A5PQ49AS3 106 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 PHLDA2Q53GA4 152 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 KLF17Q5JT82 389 aaPredicted RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 SOHLH1Q5JUK2 328 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 UBE2UQ5VVX9 321 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 STEAP1BQ6NZ63 245 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 RPL22L1Q6P5R6 122 aaKnown RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 DUX4L9Q6RFH8 374 aaPredicted RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 Q6ZSR3 168 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 C9orf139Q6ZV77 190 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 Q75L30 129 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 HSD17B13Q7Z5P4 300 aaPredicted RBP3.75□□□□□ -1.81
ZNF540-204ENST00000586792 TMED4Q7Z7H5 227 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 TRAPPC6BQ86SZ2 158 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 ANGPTL5Q86XS5 388 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 CALHM1Q8IU99 346 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 PDZD9Q8IXQ8 264 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 GBGT1Q8N5D6 347 aa3.75□□□□□ -1.81
ZNF540-204ENST00000586792 KLHDC1Q8N7A1 406 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms