RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OR52I2Q8NH67 350 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 OR4A5Q8NH83 315 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 BORCS5Q969J3 196 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 SLC2A9Q9NRM0 540 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 PEMTQ9UBM1 199 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 KLK11Q9UBX7 282 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 FBXL7Q9UJT9 491 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 TNCP24821 2201 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 NPIPB5A8MRT5 1133 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 PPP5D1E7EU14 171 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 BMPR1BO00238 502 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 RBFOX2O43251 390 aaKnown RBP eCLIP9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 PGLYRP1O75594 196 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 S1PR2O95136 353 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 DHFRP00374 187 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 IGHV3-23P01764 117 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 RLN1P04808 185 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 ZNF735P0CB33 412 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 DEFA4P12838 97 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 NQO2P16083 231 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 PSMB6P28072 239 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 PHLDA2Q53GA4 152 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 SBSPONQ8IVN8 264 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 DYNC2LI1Q8TCX1 351 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 BET1LQ9NYM9 111 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 S4R3C0 116 aa9.69□□□□□ -0.86
NPLOC4-213ENST00000573519 TRAV3A0A0B4J244 114 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 A0A1B0GW64 132 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 H0Y980 276 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 H3BMQ9 156 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 GPR31O00270 319 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 NOL3O60936 208 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 NDUFB8O95169 186 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 CSN3P07498 182 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 ERVK-16P61578 105 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 IL34Q6ZMJ4 242 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 SGPP2Q8IWX5 399 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 CMTM1Q8IZ96 169 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 CD300LFQ8TDQ1 290 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 ISOC1Q96CN7 298 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 COMMD5Q9GZQ3 224 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 TMEM140Q9NV12 185 aa9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 CCDC59Q9P031 241 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-213ENST00000573519 UPK2O00526 184 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 HLA-AP01891 365 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 CD3DP04234 171 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 LPAR6P43657 344 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 LCN12Q6JVE5 192 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 CLEC19AQ6UXS0 136 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 BCL7BQ9BQE9 202 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 C6orf62Q9GZU0 229 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 PLEKHA2Q9HB19 425 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 COMMD9Q9P000 198 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 MTFP1Q9UDX5 166 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 CEPT1Q9Y6K0 416 aa9.67□□□□□ -0.86
NPLOC4-213ENST00000573519 CGB1A6NKQ9 187 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 GGCTO75223 188 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 OR2C1O95371 312 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 CRYGCP07315 174 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 HIST1H1BP16401 226 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 CTRB1P17538 263 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 F2RP25116 425 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 ARL3P36405 182 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 OR2B8PP59922 312 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 FAM209BQ5JX69 171 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 CTRB2Q6GPI1 263 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 GTSCR1Q86UQ5 136 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 Q8N1Y9 231 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 Q8N402 240 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 OR4D10Q8NGI6 311 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 FCAMRQ8WWV6 532 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 EEF1AKMT3Q96AZ1 226 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 DGCR14Q96DF8 476 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 DIRAS2Q96HU8 199 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 RCHY1Q96PM5 261 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 FANCD2OSQ96PS1 177 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 ZMAT4Q9H898 229 aa9.66□□□□□ -0.86
NPLOC4-213ENST00000573519 IZUMO1RA6ND01 250 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 CCDC160A6NGH7 325 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 MARCH11A6NNE9 402 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 TPPPO94811 219 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 KRASP01116 189 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 IFNA6P05013 189 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 PGAM2P15259 253 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 PI3P19957 117 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 S100GP29377 79 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 G6PCP35575 357 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 POU2AF1Q16633 256 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 ZNF585BQ52M93 769 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 RNASE10Q5GAN6 216 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 TBC1D26Q86UD7 250 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 OR10W1Q8NGF6 305 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 C15orf40Q8WUR7 153 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 CCDC140Q96MF4 163 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 HINT2Q9BX68 163 aa9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 QTRT1Q9BXR0 403 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-213ENST00000573519 SLIRPQ9GZT3 109 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms