RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 PALMDQ9NP74 551 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 FKBP11Q9NYL4 201 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 PRNDQ9UKY0 176 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 NSG2Q9Y328 171 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 TMEM56-RWDD3S4R434 201 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 C9orf170A2RU37 121 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 MSGN1A6NI15 193 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 G3V318 75 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 FBXO24O75426 580 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 IGKV1-5P01602 117 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 IL6RP08887 468 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 DCTN2Q13561 401 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 MRGPRG-AS1Q2M3A8 158 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 LYG2Q86SG7 212 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 FAM219AQ8IW50 185 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 CADM3Q8N126 398 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 C11orf44Q8N8P7 122 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 COQ8AQ8NI60 647 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 WFDC12Q8WWY7 111 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 SPIN2AQ99865 258 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 SPIN2BQ9BPZ2 258 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 HINT2Q9BX68 163 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 ALX4Q9H161 411 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 ZNF580Q9UK33 172 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 FBXO7Q9Y3I1 522 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 OR51B2Q9Y5P1 312 aa11.42□□□□□ -0.58
NPLOC4-209ENST00000572760 A0A0B4J2A0 478 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 A0A1W2PN81 502 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 APELAP0DMC3 54 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 CHRNA7P36544 502 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 OR2B8PP59922 312 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 SSBP2P81877 361 aaPredicted RBP11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 DHRS2Q13268 280 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 IZUMO4Q1ZYL8 232 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 AKIRIN2Q53H80 203 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 TEX38Q6PEX7 206 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 COMMD1Q8N668 190 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 SLC35G3Q8N808 338 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 DUSP18Q8NEJ0 188 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 OR1L8Q8NGR8 309 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 TMEM68Q96MH6 324 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 PDCD10Q9BUL8 212 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 ZNF747Q9BV97 191 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 SHPKQ9UHJ6 478 aa11.41□□□□□ -0.58
NPLOC4-209ENST00000572760 DUXBA0A1W2PPF3 345 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 C15orf61A6NNL5 157 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 INMT-MINDY4F8WBC2 141 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 EGR2P11161 476 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 MYOD1P15172 320 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 CRIP2P52943 208 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 ANKRD55Q3KP44 614 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 KHDC1LQ5JSQ8 128 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 LYZL2Q7Z4W2 148 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 OR5T1Q8NG75 326 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 LSM10Q969L4 123 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 GPR146Q96CH1 333 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-209ENST00000572760 FBN1P35555 2871 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 TEX50A0A1B0GTY4 177 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 TCRBV4S1A1TA0A5B7 111 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 HMX3A6NHT5 357 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 DUS4LO95620 317 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 DHFRP00374 187 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 FGF2P09038 288 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 HOXB5P09067 269 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 TRAPPC2P0DI81 140 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 TRAPPC2BP0DI82 140 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 PF4V1P10720 104 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 CD28P10747 220 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 MECP2P51608 486 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 SRSF4Q08170 494 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 CXorf66Q5JRM2 361 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 TMEM65Q6PI78 240 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 SHISA2Q6UWI4 295 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 C10orf99Q6UWK7 81 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 LRTM2Q8N967 370 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 OR52B4Q8NGK2 314 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 OR5B3Q8NH48 314 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 SEC22CQ9BRL7 303 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 QTRT1Q9BXR0 403 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 GPN1Q9HCN4 374 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 CACNG5Q9UF02 275 aa11.39□□□□□ -0.59
NPLOC4-209ENST00000572760 A0A0G2JRQ6 117 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 PTTG1O95997 202 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 IFNA21P01568 189 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 IFNA17P01571 189 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 ELANEP08246 267 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 SULT1A3P0DMM9 295 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 SULT1A4P0DMN0 295 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 THOC7Q6I9Y2 204 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 MRPL41Q8IXM3 137 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 UXS1Q8NBZ7 420 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 OR5M8Q8NGP6 311 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 ZNF431Q8TF32 576 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 COA4Q9NYJ1 87 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
NPLOC4-209ENST00000572760 WNK1Q9H4A3 2382 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms