RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 EBLN2Q6P2I7 272 aa7.82□□□□□ -1.16
CDH1-205ENST00000562836 NFE4Q86UQ8 179 aa7.82□□□□□ -1.16
CDH1-205ENST00000562836 UBE2E3Q969T4 207 aa7.82□□□□□ -1.16
CDH1-205ENST00000562836 TMEM30AQ9NV96 361 aa7.82□□□□□ -1.16
CDH1-205ENST00000562836 BPTFQ12830 3046 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 IGKV6-21A0A0C4DH24 114 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 PITX3O75364 302 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 HLA-DQA2P01906 255 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 RBP4P02753 201 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 PSMB3P49720 205 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 STC1P52823 247 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 CLDN17P56750 224 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 C1orf61Q13536 156 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 OR8B3Q8NGG8 313 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 ADAT3Q96EY9 351 aaPredicted RBP7.81□□□□□ -1.16
CDH1-205ENST00000562836 AGMATQ9BSE5 352 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 SSBP3Q9BWW4 388 aaPredicted RBP7.81□□□□□ -1.16
CDH1-205ENST00000562836 CISD1Q9NZ45 108 aaKnown RBP7.81□□□□□ -1.16
CDH1-205ENST00000562836 CEBPZOSA8MTT3 80 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 SYS1-DBNDD2H3BUS1 97 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 PRSS56P0CW18 603 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 BCL2P10415 239 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 CSN1S1P47710 185 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 ZNF718Q3SXZ3 478 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 C9orf153Q5TBE3 101 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 EEF1DP3Q658K8 133 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 ZNF324BQ6AW86 544 aaPredicted RBP7.81□□□□□ -1.16
CDH1-205ENST00000562836 C1QL2Q7Z5L3 287 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 ZNF502Q8TBZ5 544 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 C8orf44Q96CB5 159 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 CHCHD5Q9BSY4 110 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 BEX4Q9NWD9 120 aaPredicted RBP7.81□□□□□ -1.16
CDH1-205ENST00000562836 PCTPQ9UKL6 214 aa7.81□□□□□ -1.16
CDH1-205ENST00000562836 DYSFO75923 2080 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 ZC3H12DA2A288 527 aaKnown RBP7.8□□□□□ -1.16
CDH1-205ENST00000562836 STK17BO94768 372 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 SSR2P43308 183 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 LIM2P55344 173 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 MTCP1P56278 107 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 UBE2G1P62253 170 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 IL15RAQ13261 267 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 ZNF672Q499Z4 452 aaPredicted RBP7.8□□□□□ -1.16
CDH1-205ENST00000562836 SP5Q6BEB4 398 aaPredicted RBP7.8□□□□□ -1.16
CDH1-205ENST00000562836 AMTNQ6UX39 209 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 LIAT1Q6ZQX7 453 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.8□□□□□ -1.16
CDH1-205ENST00000562836 FAM90A26D6RGX4 464 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 CHEK1O14757 476 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 PAGE4O60829 102 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 CRLF1O75462 422 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 OR9G9P0C7N8 305 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 NMUP48645 174 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 RPL34P49207 117 aaKnown RBP7.8□□□□□ -1.16
CDH1-205ENST00000562836 EFNB2P52799 333 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 Q6ZQT7 251 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 GAPTQ8N292 157 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 SGMS2Q8NHU3 365 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 TSKUQ8WUA8 353 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 MPC1Q9Y5U8 109 aa7.8□□□□□ -1.16
CDH1-205ENST00000562836 POLR2AP24928 1970 aaKnown RBP7.79□□□□□ -1.16
CDH1-205ENST00000562836 SAA2-SAA4A0A096LPE2 208 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 FCN1O00602 326 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 ANGPTL7O43827 346 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 PRKNO60260 465 aaPredicted RBP7.79□□□□□ -1.16
CDH1-205ENST00000562836 MPDU1O75352 247 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 DEDDO75618 318 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 HBE1P02100 147 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 FGF1P05230 155 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 CR2P20023 1033 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 CX3CL1P78423 397 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 GGTLC2Q14390 218 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 IHHQ14623 411 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 DMKNQ6E0U4 476 aaPredicted RBP7.79□□□□□ -1.16
CDH1-205ENST00000562836 WFDC3Q8IUB2 231 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 NEURL3Q96EH8 262 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 MRPL32Q9BYC8 188 aaKnown RBP7.79□□□□□ -1.16
CDH1-205ENST00000562836 ULBP3Q9BZM4 244 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 ZNF665Q9H7R5 613 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 PLXNA1Q9UIW2 1896 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 K7EQS6 105 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 LINC01620Q4KN68 170 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 OR4X2Q8NGF9 303 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 OR1F12Q8NHA8 337 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 TTTY10Q9BZA0 68 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 CHST8Q9H2A9 424 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 NSG2Q9Y328 171 aa7.79□□□□□ -1.16
CDH1-205ENST00000562836 F11RQ9Y624 299 aaKnown RBP7.79□□□□□ -1.16
CDH1-205ENST00000562836 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
CDH1-205ENST00000562836 FAM181BA6NEQ2 426 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 CDC42EP2O14613 210 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 NUDT14O95848 222 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 SMIM13P0DJ93 91 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 WASP42768 502 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 RPS14P62263 151 aaKnown RBP7.78□□□□□ -1.16
CDH1-205ENST00000562836 SRSF9Q13242 221 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDH1-205ENST00000562836 OR1C1Q15619 314 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 SSX8Q7RTT4 187 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 TMEM150AQ86TG1 271 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 MBD3L2Q8NHZ7 208 aaPredicted RBP7.78□□□□□ -1.16
CDH1-205ENST00000562836 OR8B2Q96RD0 313 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms