RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 IGFBP7Q16270 282 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 FAM214BQ7L5A3 538 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 MUC15Q8N387 334 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 OR4P4Q8NGL7 312 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 TMEM204Q9BSN7 226 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 FAM103A1Q9BTL3 118 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 PTPRBP23467 1997 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 TRAV24A0A0B4J272 114 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 TRAV17A0A0B4J275 112 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 SNURFLB1AK76 121 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 RHBDL1O75783 438 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 LYZL6O75951 148 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 TOX4O94842 621 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 CLDN1O95832 211 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 GABRA2P47869 451 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 MRPL49Q13405 166 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 VAMP3Q15836 100 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 RPEL1Q2QD12 228 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 STUMQ69YW2 141 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 IGF2-ASQ6U949 168 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 PCSK4Q6UW60 755 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 ZNF114Q8NC26 417 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 RDH5Q92781 318 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 EP300Q09472 2414 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 C3orf80F5H4A9 247 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 K7ERU9 68 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 SH2D1BO14796 132 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 ATP5G3P48201 142 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 GABRA6Q16445 453 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 Q6ZT83 130 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 WDR86Q86TI4 376 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 UHRF2Q96PU4 802 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 RTL8AQ9BWD3 113 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 CLN8Q9UBY8 286 aa11.62□□□□□ -0.55
RABGGTA-220ENST00000560998 A0A1W2PS18 150 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 C9JCJ5 164 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 TMEM238C9JI98 176 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 F2Z2F3 143 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 C3orf79P0CE67 100 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 IZUMO4Q1ZYL8 232 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 INO80CQ6PI98 192 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 C20orf204Q6ZNR8 217 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 OR10P1Q8NGE3 313 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 BORCS7Q96B45 105 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 DLL3Q9NYJ7 618 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 TRAV9-2A0A087WT02 112 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 TRAV34A0A0B4J273 112 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 CRYAAP02489 173 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 CD1BP29016 333 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 KIR2DL2P43627 348 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 IER3P46695 156 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 ARF6P62330 175 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 DEFB109BQ30KR1 87 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 KRTCAP3Q53RY4 240 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 LDLRAD2Q5SZI1 272 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 Q6P435 159 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 PET117Q6UWS5 81 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 CNEP1R1Q8N9A8 125 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 C9orf106Q8NAJ2 232 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 DERL1Q9BUN8 251 aa11.61□□□□□ -0.55
RABGGTA-220ENST00000560998 TRBV20OR9-2A0A075B6H5 130 aa11.6□□□□□ -0.55
RABGGTA-220ENST00000560998 J3QR06 171 aa11.6□□□□□ -0.55
RABGGTA-220ENST00000560998 M0QZ24 198 aa11.6□□□□□ -0.55
RABGGTA-220ENST00000560998 NDUFS8O00217 210 aa11.6□□□□□ -0.55
RABGGTA-220ENST00000560998 RAC2P15153 192 aa11.6□□□□□ -0.55
RABGGTA-220ENST00000560998 SCCPDHQ8NBX0 429 aa11.6□□□□□ -0.55
RABGGTA-220ENST00000560998 SLC25A40Q8TBP6 338 aa11.6□□□□□ -0.55
RABGGTA-220ENST00000560998 NUDT11Q96G61 164 aa11.6□□□□□ -0.55
RABGGTA-220ENST00000560998 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 PMCHP20382 165 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 ZNF83P51522 516 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 HTD2P86397 168 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 ALKBH6Q3KRA9 238 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 NIT1Q86X76 327 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 OR4F17Q8NGA8 305 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 OCC1Q8TAD7 63 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 SARAFQ96BY9 339 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 IQCF6A8MYZ5 107 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 PRR33A8MZF0 331 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 CEACAM4O75871 244 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 CA2P00918 260 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 HLA-DQA1P01909 254 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 OR10J4P0C629 311 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 EGR1P18146 543 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 ERVK11-1P61568 191 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 TFF3Q07654 80 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 VWA1Q6PCB0 445 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 MMD2Q8IY49 270 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 Q8IYB0 196 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 WDR31Q8NA23 367 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 ERRFI1Q9UJM3 462 aaPredicted RBP11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 POLDIP2Q9Y2S7 368 aa11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 RBM7Q9Y580 266 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-220ENST00000560998 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF891A8MT65 544 aaPredicted RBP11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 PSG7Q13046 419 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF585BQ52M93 769 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 CLEC2AQ6UVW9 174 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 C1orf162Q8NEQ5 155 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms