RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 SLC17A2O00624 439 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 NPIPB7O75200 414 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 NDUFS7O75251 213 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 KLF7O75840 302 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 EPPINO95925 133 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 CYB5AP00167 134 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 CGAP01215 116 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 NFYAP23511 347 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 MYCNOSP40205 109 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 CCL23P55773 120 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 ZNF90Q03938 601 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 FOXI1Q12951 378 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 SPANXN4Q5MJ08 99 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 LINC01545Q5VT33 79 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 LCN8Q6JVE9 175 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 Q6ZUT4 128 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 C9orf139Q6ZV77 190 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 ZNF571Q7Z3V5 609 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 TRPT1Q86TN4 253 aaKnown RBP3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 GTSCR1Q86UQ5 136 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 LHFPL1Q86WI0 220 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 EXOC3-AS1Q8N2X6 119 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 OR2T33Q8NG76 320 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 OR4K13Q8NH42 304 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 OR4A5Q8NH83 315 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 OR2T6Q8NHC8 308 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 ELSPBP1Q96BH3 223 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 GNPNAT1Q96EK6 184 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 BORCS8Q96FH0 119 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 LINC00526Q96FQ7 95 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 FAM19A4Q96LR4 140 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 BBC3Q96PG8 261 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 LINC01587Q99440 93 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 TBL1YQ9BQ87 522 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 PLAC1Q9HBJ0 212 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 TMEM242Q9NWH2 141 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 CACFD1Q9UGQ2 172 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 PTPRFP10586 1907 aa3.59□□□□□ -1.83
HMGB3P26-201ENST00000560051 LRRC9Q6ZRR7 1453 aa3.59□□□□□ -1.84
HMGB3P26-201ENST00000560051 PRXQ9BXM0 1461 aa3.59□□□□□ -1.84
HMGB3P26-201ENST00000560051 CUX1P39880 1505 aa3.59□□□□□ -1.84
HMGB3P26-201ENST00000560051 ABCA5Q8WWZ7 1642 aa3.59□□□□□ -1.84
HMGB3P26-201ENST00000560051 ADAMTSL3P82987 1691 aa3.59□□□□□ -1.84
HMGB3P26-201ENST00000560051 CCDC88AQ3V6T2 1871 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 NUP205Q92621 2012 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 IGLV3-22A0A075B6J6 115 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 TRAV27A0A087WT01 109 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 TRGV10A0A0A0MS01 117 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 SMIM35A0A1B0GVV1 85 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 WI2-2373I1.2A0A1W2PRP0 233 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 IRGMA1A4Y4 181 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 TLCD2A6NGC4 264 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 LY6LH3BQJ8 138 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 TYROBPO43914 113 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 NDUFS5O43920 106 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 LYZL6O75951 148 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 CDK2AP2O75956 126 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 NDUFB2O95178 105 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 PMS2P2O95744 297 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 IGKV5-2P06315 115 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 H2AFZP0C0S5 128 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 SDC2P34741 201 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 OPRM1P35372 400 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 RPS10P46783 165 aaKnown RBP3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 RPS11P62280 158 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 HERVK_113P63121 156 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 PAX8Q06710 450 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 KIAA0040Q15053 153 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 ZNF141Q15928 474 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 ZNF260Q3ZCT1 412 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 Q56UQ5 140 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 CENPWQ5EE01 88 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 FAM120AOSQ5T036 256 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 FAM219BQ5XKK7 198 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 LCN12Q6JVE5 192 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 FAM57BQ71RH2 274 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 RPS19BP1Q86WX3 136 aaKnown RBP3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 RFLNBQ8N5W9 214 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 APCDD1LQ8NCL9 501 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 SCGB1C1Q8TD33 95 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 MYEOVQ96EZ4 313 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 OR2A5Q96R48 311 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 SOSTQ9BQB4 213 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 PAXXQ9BUH6 204 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 SRXN1Q9BYN0 137 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 AICDAQ9GZX7 198 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 NPVFQ9HCQ7 196 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 CA10Q9NS85 328 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 MARCOQ9UEW3 520 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 LINC00312Q9Y6C7 94 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 CHCHD2Q9Y6H1 151 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 PXMP4Q9Y6I8 212 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 ADGRB3O60242 1522 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 SETBP1Q9Y6X0 1596 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 LTN1O94822 1766 aa3.58□□□□□ -1.84
HMGB3P26-201ENST00000560051 TRAV8-6A0A0B4J262 113 aa3.57□□□□□ -1.84
HMGB3P26-201ENST00000560051 LOC107984640A0A0U1RRK4 108 aa3.57□□□□□ -1.84
HMGB3P26-201ENST00000560051 C3orf85A0A1B0GTC6 90 aa3.57□□□□□ -1.84
HMGB3P26-201ENST00000560051 A0A1B0GXF2 115 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms