RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 C3orf56Q8N813 242 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 LHX4Q969G2 390 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 LIN7CQ9NUP9 197 aaKnown RBP8.37□□□□□ -1.07
TPM1-212ENST00000558347 FBXO7Q9Y3I1 522 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 FAM90A26D6RGX4 464 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 UBE2CO00762 179 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 TMEM50AO95807 157 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
TPM1-212ENST00000558347 DLX1P56177 255 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 BPIFB3P59826 476 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 PRB3Q04118 309 aaPredicted RBP8.36□□□□□ -1.07
TPM1-212ENST00000558347 AESQ08117 197 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 KHDC3LQ587J8 217 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 LRRC10Q5BKY1 277 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 KRBOX4Q5JUW0 171 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 TRAT1Q6PIZ9 186 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 Q6YL49 198 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 VMO1Q7Z5L0 202 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 ZBTB34Q8NCN2 500 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 ZNRF1Q8ND25 227 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 GPR146Q96CH1 333 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 TCEAL7Q9BRU2 100 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 PSMG3Q9BT73 122 aaPredicted RBP8.36□□□□□ -1.07
TPM1-212ENST00000558347 DCTN5Q9BTE1 182 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 MAGT1Q9H0U3 335 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 ONECUT1Q9UBC0 465 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 TRAPPC2LQ9UL33 140 aa8.36□□□□□ -1.07
TPM1-212ENST00000558347 IGHV1-69DA0A0B4J2H0 117 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 C5orf52A6NGY3 159 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 IGHV1-69P01742 117 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
TPM1-212ENST00000558347 RAB5AP20339 215 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 GLIPR1P48060 266 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 MEOX2P50222 304 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 FOXL1Q12952 345 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 Q8N7P7 452 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 C8orf46Q8TAG6 207 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 CD300LFQ8TDQ1 290 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 H1FXQ92522 213 aaKnown RBP8.35□□□□□ -1.07
TPM1-212ENST00000558347 ZDHHC16Q969W1 377 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 C12orf57Q99622 126 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 TNFRSF19Q9NS68 423 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 METTL1Q9UBP6 276 aaKnown RBP8.35□□□□□ -1.07
TPM1-212ENST00000558347 SLC25A10Q9UBX3 287 aaPredicted RBP8.35□□□□□ -1.07
TPM1-212ENST00000558347 MMP24Q9Y5R2 645 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 PKD1L1Q8TDX9 2849 aa8.35□□□□□ -1.07
TPM1-212ENST00000558347 A0A0U1RQK1 487 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 ODAMA1E959 279 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 CXorf65A6NEN9 183 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 GPR37O15354 613 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
TPM1-212ENST00000558347 CST7O76096 145 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 SCAF4O95104 1147 aaKnown RBP8.34□□□□□ -1.07
TPM1-212ENST00000558347 S100A6P06703 90 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 SMIM6P0DI80 62 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 OR13C7P0DN81 318 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 NDUFB7P17568 137 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 GZMHP20718 246 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 OMGP23515 440 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 HBG1P69891 147 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 HBG2P69892 147 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 MEF2CQ06413 473 aaPredicted RBP8.34□□□□□ -1.07
TPM1-212ENST00000558347 PMS2P11Q13670 270 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 ICAM4Q14773 271 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 ETV3LQ6ZN32 361 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 PIP4P2Q8N4L2 257 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 RNASE11Q8TAA1 199 aaKnown RBP8.34□□□□□ -1.07
TPM1-212ENST00000558347 CORO2AQ92828 525 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 TOLLIPQ9H0E2 274 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 SIRT7Q9NRC8 400 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 KCNIP1Q9NZI2 227 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 OR6C3Q9NZP0 311 aa8.34□□□□□ -1.07
TPM1-212ENST00000558347 A0A0G2JRQ6 117 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 A0A1W2PPH5 198 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 FAM181BA6NEQ2 426 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 B4DEV8 164 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 TNFSF12O43508 249 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 SYNGR2O43760 224 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 IFNA17P01571 189 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 CGB3P0DN86 165 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 CGB7P0DN87 165 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 SERF2P84101 59 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 KLRD1Q13241 179 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 AKIRIN2Q53H80 203 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 C5orf24Q7Z6I8 188 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 SLC35E3Q7Z769 313 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 KIR3DL3Q8N743 410 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 TCTEX1D1Q8N7M0 179 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 OR13A1Q8NGR1 328 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 SCGB1C1Q8TD33 95 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 C2CD4CQ8TF44 421 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 MBD3L1Q8WWY6 194 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 ZNF747Q9BV97 191 aa8.34□□□□□ -1.08
TPM1-212ENST00000558347 DSCAML1Q8TD84 2053 aa8.33□□□□□ -1.08
TPM1-212ENST00000558347 LOC102723971A0A1B0GUV8 181 aa8.33□□□□□ -1.08
TPM1-212ENST00000558347 C12orf77C9JDV5 145 aa8.33□□□□□ -1.08
TPM1-212ENST00000558347 H3BQ15 152 aa8.33□□□□□ -1.08
TPM1-212ENST00000558347 OR2C1O95371 312 aa8.33□□□□□ -1.08
TPM1-212ENST00000558347 IGKV1-39P01597 117 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms