RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 EDDM3AQ14507 147 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 S100A7AQ86SG5 101 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 SMCR5Q8TEV8 140 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 TMEM222Q9H0R3 208 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 DCSTAMPQ9H295 470 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 GLTPQ9NZD2 209 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 AK3Q9UIJ7 227 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 PRELID3BQ9Y3B1 194 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 EIF4G3O43432 1585 aaKnown RBP1.71□□□□□ -2.14
SCFD1-221ENST00000556534 PKD1L2Q7Z442 2459 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 CDK12Q9NYV4 1490 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-221ENST00000556534 FAM236DA0A1B0GTK5 79 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 A0A1B0GV50 99 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 KNCNA6PVL3 124 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 H3BPC8 53 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 PSMD12O00232 456 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF73O43830 326 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-221ENST00000556534 PIK3C2GO75747 1445 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 TTRP02766 147 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF728P0DKX0 622 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 FAM236CP0DP71 79 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 PSME3P61289 254 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 SNRPD2P62316 118 aaKnown RBP1.7□□□□□ -2.14
SCFD1-221ENST00000556534 CCDC88AQ3V6T2 1871 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 TMEM97Q5BJF2 176 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 SSX8Q7RTT4 187 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 HEATR5AQ86XA9 2040 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 DOCK3Q8IZD9 2030 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 OR6V1Q8N148 313 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF283Q8N7M2 679 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 OR4C16Q8NGL9 310 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 FGF13Q92913 245 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 C20orf166-AS1Q96NR2 134 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 KLF6Q99612 283 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF471Q9BX82 626 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-221ENST00000556534 CISHQ9NSE2 258 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 TXNL4BQ9NX01 149 aaKnown RBP1.7□□□□□ -2.14
SCFD1-221ENST00000556534 FBXO5Q9UKT4 447 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 RBM7Q9Y580 266 aaKnown RBP1.7□□□□□ -2.14
SCFD1-221ENST00000556534 FAM215AQ9Y5M1 114 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 SLIT2O94813 1529 aa1.7□□□□□ -2.14
SCFD1-221ENST00000556534 CPAMD8Q8IZJ3 1885 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 GLI2P10070 1586 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 NCOA1Q15788 1441 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 KIF13BQ9NQT8 1826 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 A0A0J9YY10 115 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 A0A1B0GX78 115 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 A0A1W2PQD3 144 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 C11orf86A6NJI1 115 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 FAAHO00519 579 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 SERPINA1P01009 418 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 CCL5P13501 91 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 BLVRBP30043 206 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-221ENST00000556534 DEFA1P59665 94 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 RPS20P60866 119 aaKnown RBP1.69□□□□□ -2.14
SCFD1-221ENST00000556534 RPL30P62888 115 aaKnown RBP1.69□□□□□ -2.14
SCFD1-221ENST00000556534 GNA12Q03113 381 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 CAV1Q03135 178 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 KCNJ8Q15842 424 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 AKIRIN2Q53H80 203 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 TMPPEQ6ZT21 453 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 SLC35F6Q8N357 371 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 OR8B12Q8NGG6 310 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 OR13C8Q8NGS7 320 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF675Q8TD23 568 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 ROPN1LQ96C74 230 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 DCUN1D1Q96GG9 259 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 MIEN1Q9BRT3 115 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 PAQR5Q9NXK6 330 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-221ENST00000556534 IL20Q9NYY1 176 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 IDI2-AS1Q9NZ38 188 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 CCL26Q9Y258 94 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 SAMHD1Q9Y3Z3 626 aaKnown RBP1.69□□□□□ -2.14
SCFD1-221ENST00000556534 MALRD1Q5VYJ5 2156 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 MADDQ8WXG6 1647 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 ALKQ9UM73 1620 aa1.69□□□□□ -2.14
SCFD1-221ENST00000556534 PTPRBP23467 1997 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 PLXND1Q9Y4D7 1925 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 IGKV1D-43A0A0B4J1Z2 117 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TRAV26-2A0A0B4J265 109 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TMEM269A0A1B0GVZ9 245 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 A0A1B0GW54 56 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TMEM235A6NFC5 223 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 OR4C46A6NHA9 309 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 I3L521 148 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TNRC18O15417 2968 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-221ENST00000556534 GNRH2O43555 120 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 NPYP01303 97 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 HLA-DRB1P01911 266 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 KCNE1P15382 129 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 CD24P25063 80 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 RAB13P51153 203 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TAS2R20P59543 309 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 MRPS25P82663 173 aaKnown RBP1.68□□□□□ -2.14
SCFD1-221ENST00000556534 CDK10Q15131 360 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 Q6ZS49 121 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TCF24Q7RTU0 167 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 GLT6D1Q7Z4J2 308 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 C20orf196Q8IYI0 205 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF676Q8N7Q3 588 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms