RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 LDLRAD2Q5SZI1 272 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 VKORC1L1Q8N0U8 176 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 MAP1LC3AQ9H492 121 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 hCG_38984A0A1B0GV85 526 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 PROB1E7EW31 1015 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 BMI1P35226 326 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 OR4D5Q8NGN0 318 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 HEATR5BQ9P2D3 2071 aa13.42□□□□□ -0.26
RBFOX1-212ENST00000550418 UTRNP46939 3433 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 IGKV1D-8A0A087WSZ0 117 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 LDLRAD4O15165 306 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 NAPSAO96009 420 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 CRYABP02511 175 aaKnown RBP13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 A0A0A6YYD4 124 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 M0QZ24 198 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 MGPP08493 103 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 TBR1Q16650 682 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 HCP5Q6MZN7 132 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 TCF24Q7RTU0 167 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 ZNF256Q9Y2P7 627 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 SPCS1Q9Y6A9 102 aa13.41□□□□□ -0.26
RBFOX1-212ENST00000550418 ATXN7O15265 892 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 GOSR1O95249 250 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 PTGDSP41222 190 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 ZNF414Q96IQ9 312 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 LOXL4Q96JB6 756 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 AKIRIN1Q9H9L7 192 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 JPT1Q9UK76 154 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 PATE3B3GLJ2 98 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 ZNF324O75467 553 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 DGAT2L7PQ6IED9 249 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 A0A1W2PRS3 328 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 CALYQ9NYX4 217 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 C2orf83Q53S99 150 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 ZNF664Q8N3J9 261 aa13.4□□□□□ -0.26
RBFOX1-212ENST00000550418 RALGAPA2Q2PPJ7 1873 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 TRAV1-1A0A0B4J248 108 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 C7orf71A4D174 169 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 J3KRW8 73 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 ATP5IP56385 69 aaPredicted RBP13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 ACSF3Q4G176 576 aaPredicted RBP13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 IGKV1D-13A0A0B4J2D9 117 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 A0A1W2PRD5 423 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 A0A1W2PRF3 423 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 A0A1W2PRM7 423 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 IGKV1-13P0DP09 117 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 TTC32Q5I0X7 151 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 FAM166AQ6J272 317 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 SRXN1Q9BYN0 137 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 ZNF146Q15072 292 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 PCSK4Q6UW60 755 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 LGALS7P47929 136 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 OR5P3Q8WZ94 311 aa13.39□□□□□ -0.27
RBFOX1-212ENST00000550418 UCNP55089 124 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 TRPM7Q96QT4 1865 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 IZUMO1RA6ND01 250 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 H3BTX0 84 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 NPIPB3Q92617 1050 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 DERL1Q9BUN8 251 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 TTTY12Q9BZ98 90 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 DUSP15Q9H1R2 295 aaPredicted RBP13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 MS4A5Q9H3V2 200 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 SLC25A10Q9UBX3 287 aaPredicted RBP13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 ARHGEF17Q96PE2 2063 aaPredicted RBP13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 PGPEP1LA6NFU8 196 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 C17orf98A8MV24 154 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 SYNGR3O43761 229 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 MC5RP33032 325 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 GFRALQ6UXV0 394 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 ZNF714Q96N38 554 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 CCL13Q99616 98 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 TTC28Q96AY4 2481 aa13.38□□□□□ -0.27
RBFOX1-212ENST00000550418 KHDC1LQ5JSQ8 128 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 ZNF788Q6ZQV5 615 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 C1orf174Q8IYL3 243 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 HS3ST3B1Q9Y662 390 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 SCN8AQ9UQD0 1980 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 GPR183P32249 361 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 MRPL13Q9BYD1 178 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 C12orf77C9JDV5 145 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 H3BUT2 72 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 H7C2G1 150 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 IGHV2-70P01814 119 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 COX6CP09669 75 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 CCL1P22362 96 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 GPR6P46095 362 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 TMEM208Q9BTX3 173 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 VSIRQ9H7M9 311 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 SLC25A17O43808 307 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 GZMBP10144 247 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 GOLT1AQ6ZVE7 132 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 OCC1Q8TAD7 63 aa13.37□□□□□ -0.27
RBFOX1-212ENST00000550418 IGHV1-45A0A0A0MS14 117 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 IGFBP2P18065 325 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 RPS20P60866 119 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 MST1LQ2TV78 715 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms