RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 IL6RP08887 468 aaPredicted RBP15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 CCL3L1P16619 93 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 OPRK1P41145 380 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 SSX3Q99909 188 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 GGTLC1Q9BX51 225 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 PATZ1Q9HBE1 687 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 NAT8Q9UHE5 227 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 ARFGEF3Q5TH69 2177 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 PPIAL4EA0A075B759 164 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 PCP4L1A6NKN8 68 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 PPIAL4DF5H284 164 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 PPIAL4FP0DN26 164 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 RND2P52198 227 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 ARSJQ5FYB0 599 aaPredicted RBP15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 CYP2G1PQ6ZSU1 146 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 OR13D1Q8NGV5 346 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 CCL17Q92583 94 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 PARLQ9H300 379 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 PPIAL4AQ9Y536 164 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 OR51B2Q9Y5P1 312 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 SPTBN4Q9H254 2564 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 CLDN34H7C241 214 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 NPY1RP25929 384 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 MEOX2P50222 304 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 MEF2CQ06413 473 aaPredicted RBP15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 TMEM241Q24JQ0 296 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 MIC13Q5XKP0 118 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 SLC24A4Q8NFF2 622 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 NEUROG1Q92886 237 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 SLC35D1Q9NTN3 355 aa15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 LSM4Q9Y4Z0 139 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-208ENST00000548436 SHISA9B4DS77 424 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 AP4M1O00189 453 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 CA2P00918 260 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 FAM87AP0C7U9 286 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 ADIRFQ15847 76 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 TMEM200BQ69YZ2 307 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 LYPD2Q6UXB3 125 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 RND1Q92730 232 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 RAB1CQ92928 201 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 GAL3ST2Q9H3Q3 398 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 PXMP4Q9Y6I8 212 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 PTPRQQ9UMZ3 2332 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 CEP295Q9C0D2 2601 aa15.14■□□□□ 0.01
PRPF40B-208ENST00000548436 TNFRSF13BO14836 293 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 ZNF833PQ6ZTB9 187 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 SSX8Q7RTT4 187 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 DMRTC2Q8IXT2 367 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 C1orf87Q8N0U7 546 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 RNASE6Q93091 150 aaKnown RBP15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 ZNF714Q96N38 554 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 HINT2Q9BX68 163 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 NPVFQ9HCQ7 196 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 TMEM106BQ9NUM4 274 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 A0A1W2PPV4 95 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 E7EQL1 145 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 UPK2O00526 184 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 RPL23P62829 140 aaKnown RBP15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 RTL8BQ17RB0 113 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 OR10A7Q8NGE5 316 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 ENY2Q9NPA8 101 aa15.13■□□□□ 0.01
PRPF40B-208ENST00000548436 SOX15O60248 233 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 NDUFS6O75380 124 aaKnown RBP15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 OPN1MWP04001 364 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 OPN1MW2P0DN77 364 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 OPN1MW3P0DN78 364 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 NPPCP23582 126 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 KIAA0141Q14154 515 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 TMEM249Q2WGJ8 235 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 SSMEM1Q8WWF3 244 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 MRPL20Q9BYC9 149 aaKnown RBP15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 PRNDQ9UKY0 176 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 C11orf94C9JXX5 98 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 J3QR06 171 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 NEIL1Q96FI4 390 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 CTDSP1Q9GZU7 261 aa15.12■□□□□ 0.01
PRPF40B-208ENST00000548436 UBE2G2P60604 165 aa15.11■□□□□ 0.01
PRPF40B-208ENST00000548436 BSXQ3C1V8 233 aa15.11■□□□□ 0.01
PRPF40B-208ENST00000548436 NCMAPQ5T1S8 102 aa15.11■□□□□ 0.01
PRPF40B-208ENST00000548436 H1FXQ92522 213 aaKnown RBP15.11■□□□□ 0.01
PRPF40B-208ENST00000548436 FAM210BQ96KR6 192 aa15.11■□□□□ 0.01
PRPF40B-208ENST00000548436 CTSZQ9UBR2 303 aa15.11■□□□□ 0.01
PRPF40B-208ENST00000548436 ZNF257Q9Y2Q1 563 aa15.11■□□□□ 0.01
PRPF40B-208ENST00000548436 TLN1Q9Y490 2541 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 PRCDQ00LT1 54 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 C16orf82Q7Z2V1 217 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 TEX50A0A1B0GTY4 177 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 VSTM5A8MXK1 200 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 TRGC2P03986 189 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 SAA1P0DJI8 122 aaPredicted RBP15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 ARL14EPLP0DKL9 152 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 ATP5G3P48201 142 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 RBPJQ06330 500 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 TEPPQ6URK8 271 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 OR51G1Q8NGK1 321 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 ABHD5Q8WTS1 349 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 PLEKHA3Q9HB20 300 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 NGBQ9NPG2 151 aa15.1■□□□□ 0.01
PRPF40B-208ENST00000548436 NDUFB3O43676 98 aa15.09■□□□□ 0.01
PRPF40B-208ENST00000548436 S100A8P05109 93 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms