RNA–Protein interactions for RNA: ENST00000547602.1

AC004801.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC004801.3, Length 962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004801.3-201ENST00000547602 LINC01560Q8TB33 94 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 RXFP4Q8TDU9 374 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 FAM216AQ8WUB2 273 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 LSM10Q969L4 123 aaKnown RBP3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 GPR146Q96CH1 333 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 C14orf79Q96F83 325 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 SDSLQ96GA7 329 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 GAFA1Q96PS6 74 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 CCL13Q99616 98 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 DCTN5Q9BTE1 182 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 SEC11CQ9BY50 192 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 PARP12Q9H0J9 701 aaKnown RBP3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 ZNF665Q9H7R5 613 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 RAB9BQ9NP90 201 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 KCNJ16Q9NPI9 418 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 RNF150Q9ULK6 438 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 RCL1Q9Y2P8 373 aaKnown RBP3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 CFAP47Q6ZTR5 3102 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 PIEZO2Q9H5I5 2752 aa3.79□□□□□ -1.8
AC004801.3-201ENST00000547602 CACNA1CQ13936 2221 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 TRGV10A0A0A0MS01 117 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 BORCS7-ASMTA0A0B4J1R7 106 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 IGHV3-43A0A0B4J1X8 118 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 TRAV38-1A0A0B4J264 116 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 KBTBD11-OT1A0A1B0GTJ5 212 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 MEX3AA1L020 520 aaKnown RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 NKX6-3A6NJ46 265 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 ZNF729A6NN14 1252 aaPredicted RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 DEFB108AA8MXU0 73 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 TMEM178BH3BS89 294 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 DVL1O14640 695 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 YPEL1O60688 119 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 PITX3O75364 302 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 CLDN1O95832 211 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 IGKV1-39P01597 117 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 IGKV1D-39P04432 117 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 CRYBA1P05813 215 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 IGHV3-43DP0DP04 118 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 NPBWR1P48145 328 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 TMEM33P57088 247 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 CATR1Q13166 79 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 EIF4EBP1Q13541 118 aaPredicted RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 LY6DQ14210 128 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 LTC4SQ16873 150 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 MORN2Q502X0 79 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 DNLZQ5SXM8 178 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 RPL7L1Q6DKI1 246 aaKnown RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 EIF5AL1Q6IS14 154 aaKnown RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 FAM53AQ6NSI3 398 aaPredicted RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 STX12Q86Y82 276 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 TGIF2LYQ8IUE0 185 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 C1orf87Q8N0U7 546 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 ZCCHC24Q8N2G6 241 aaKnown RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 FGFRL1Q8N441 504 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 TCTEX1D1Q8N7M0 179 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 RNASE11Q8TAA1 199 aaKnown RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 CA5BP1Q8WTZ4 195 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 NEUROG1Q92886 237 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 YPEL2Q96QA6 119 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 SLC25A31Q9H0C2 315 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 OR2D2Q9H210 308 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 C11orf1Q9H5F2 150 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 DYNLRB1Q9NP97 96 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 NIT2Q9NQR4 276 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 SMCO4Q9NRQ5 59 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 FAM212BQ9NTI7 297 aaPredicted RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 CALYQ9NYX4 217 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 GNG12Q9UBI6 72 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 CLN8Q9UBY8 286 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 MIOXQ9UGB7 285 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 JPT1Q9UK76 154 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 PSG11Q9UQ72 335 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 GAB2Q9UQC2 676 aa3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 NCOA6Q14686 2063 aaPredicted RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 TNRC6AQ8NDV7 1962 aaKnown RBP3.78□□□□□ -1.8
AC004801.3-201ENST00000547602 MGAQ8IWI9 3026 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 ITPR1Q14643 2758 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 PPIAL4EA0A075B759 164 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 A0A0G2JRQ6 117 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 IGLV5-39A0A0G2JS06 123 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 hADV38S2A0JD32 116 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 A4D1N5 150 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 FAM24AA6NFZ4 105 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 COLCA2A8K830 154 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 PPIAL4DF5H284 164 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 ITGB1BP1O14713 200 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 TNFRSF13BO14836 293 aaPredicted RBP3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 CHST1O43916 411 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 SSSCA1O60232 199 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 NDUFS6O75380 124 aaKnown RBP3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 CLDN14O95500 239 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 IGKV1-5P01602 117 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 IGHV2-5P01817 119 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 GAPDHP04406 335 aaKnown RBP3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 FAM157CP0CG43 387 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 PPIAL4FP0DN26 164 aa3.77□□□□□ -1.81
AC004801.3-201ENST00000547602 RAB7AP51149 207 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms