RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TMEM170AQ8WVE7 144 aa19.19■□□□□ 0.66
FOXA1-202ENST00000545425 DCTN5Q9BTE1 182 aa19.19■□□□□ 0.66
FOXA1-202ENST00000545425 GPR61Q9BZJ8 451 aa19.19■□□□□ 0.66
FOXA1-202ENST00000545425 TRGV10A0A0A0MS01 117 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 KLRB1Q12918 225 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 OR5R1Q8NH85 324 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 Q8TCH9 128 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 ENY2Q9NPA8 101 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 RNF7Q9UBF6 113 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 LSM4Q9Y4Z0 139 aaKnown RBP19.18■□□□□ 0.66
FOXA1-202ENST00000545425 DVL1O14640 695 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 TNFSF4P23510 183 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 PDLIM4P50479 330 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 HSPE1P61604 102 aaKnown RBP19.18■□□□□ 0.66
FOXA1-202ENST00000545425 SEM1Q6ZVN7 128 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 MOGAT3Q86VF5 341 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 GGTLC1Q9BX51 225 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 IL19Q9UHD0 177 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 USF3Q68DE3 2245 aa19.18■□□□□ 0.66
FOXA1-202ENST00000545425 HELZ2Q9BYK8 2649 aaKnown RBP19.17■□□□□ 0.66
FOXA1-202ENST00000545425 TFF1P04155 84 aa19.17■□□□□ 0.66
FOXA1-202ENST00000545425 C1orf185Q5T7R7 199 aa19.17■□□□□ 0.66
FOXA1-202ENST00000545425 TMEM14BQ9NUH8 114 aa19.17■□□□□ 0.66
FOXA1-202ENST00000545425 PRNDQ9UKY0 176 aa19.17■□□□□ 0.66
FOXA1-202ENST00000545425 ZNF257Q9Y2Q1 563 aa19.17■□□□□ 0.66
FOXA1-202ENST00000545425 PXMP4Q9Y6I8 212 aa19.17■□□□□ 0.66
FOXA1-202ENST00000545425 TRAV9-1A0A075B6T8 112 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 M0R1B8 84 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 HMGB3O15347 200 aaKnown RBP19.16■□□□□ 0.66
FOXA1-202ENST00000545425 ZNF83P51522 516 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 EDDM3BP56851 147 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 OR1P1Q8NH06 330 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 LY96Q9Y6Y9 160 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 CRYABP02511 175 aaKnown RBP19.16■□□□□ 0.66
FOXA1-202ENST00000545425 RPL29P47914 159 aaKnown RBP19.16■□□□□ 0.66
FOXA1-202ENST00000545425 RHOBP62745 196 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 FOXL1Q12952 345 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 LTC4SQ16873 150 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 C17orf58Q2M2W7 97 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 ACTL10Q5JWF8 245 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 LINC01551Q86U37 167 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 PACRGQ96M98 296 aaPredicted RBP19.16■□□□□ 0.66
FOXA1-202ENST00000545425 MGST2Q99735 147 aa19.16■□□□□ 0.66
FOXA1-202ENST00000545425 K7EM74 188 aa19.15■□□□□ 0.66
FOXA1-202ENST00000545425 RPL39P5Q59GN2 51 aa19.15■□□□□ 0.66
FOXA1-202ENST00000545425 SPINK9Q5DT21 86 aa19.15■□□□□ 0.66
FOXA1-202ENST00000545425 TEPPQ6URK8 271 aa19.15■□□□□ 0.66
FOXA1-202ENST00000545425 SSX8Q7RTT4 187 aa19.15■□□□□ 0.66
FOXA1-202ENST00000545425 GATAD1Q8WUU5 269 aa19.15■□□□□ 0.66
FOXA1-202ENST00000545425 MS4A5Q9H3V2 200 aa19.15■□□□□ 0.66
FOXA1-202ENST00000545425 RRHO14718 337 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 NPY1RP25929 384 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 ZNF134P52741 427 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 STUMQ69YW2 141 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 SLC24A4Q8NFF2 622 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 ITLN1Q8WWA0 313 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 HIST1H2BLQ99880 126 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 GTF3C1Q12789 2109 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 GCN1Q92616 2671 aaKnown RBP19.14■□□□□ 0.65
FOXA1-202ENST00000545425 FABP4P15090 132 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 GNB1P62873 340 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 MSMPQ1L6U9 139 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 ZNF474Q6S9Z5 364 aaPredicted RBP19.14■□□□□ 0.65
FOXA1-202ENST00000545425 LRP11Q86VZ4 500 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 ZNF383Q8NA42 475 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 RHOVQ96L33 236 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 FKBP11Q9NYL4 201 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 IDI2-AS1Q9NZ38 188 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 BAHCC1Q9P281 2608 aa19.14■□□□□ 0.65
FOXA1-202ENST00000545425 MRPS11P82912 194 aaKnown RBP19.13■□□□□ 0.65
FOXA1-202ENST00000545425 CT45A1Q5HYN5 189 aa19.13■□□□□ 0.65
FOXA1-202ENST00000545425 CST9LP1Q5W188 147 aa19.13■□□□□ 0.65
FOXA1-202ENST00000545425 Q6ZS92 163 aa19.13■□□□□ 0.65
FOXA1-202ENST00000545425 SSX9Q7RTT3 188 aa19.13■□□□□ 0.65
FOXA1-202ENST00000545425 ZNRF1Q8ND25 227 aa19.13■□□□□ 0.65
FOXA1-202ENST00000545425 ZNF439Q8NDP4 499 aa19.13■□□□□ 0.65
FOXA1-202ENST00000545425 CT45A3Q8NHU0 189 aa19.13■□□□□ 0.65
FOXA1-202ENST00000545425 C19orf24Q9BVV8 132 aa19.13■□□□□ 0.65
FOXA1-202ENST00000545425 SLC25A10Q9UBX3 287 aaPredicted RBP19.13■□□□□ 0.65
FOXA1-202ENST00000545425 NPPCP23582 126 aa19.12■□□□□ 0.65
FOXA1-202ENST00000545425 LINC00205P59089 165 aa19.12■□□□□ 0.65
FOXA1-202ENST00000545425 HOXA4Q00056 320 aaPredicted RBP19.12■□□□□ 0.65
FOXA1-202ENST00000545425 IGHV3OR15-7A0A075B7D8 119 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 TRAV38-1A0A0B4J264 116 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 TRAV20A0A0B4J274 112 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 IL6RP08887 468 aaPredicted RBP19.11■□□□□ 0.65
FOXA1-202ENST00000545425 AREGP15514 252 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 PKIAP61925 76 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 C4orf17Q53FE4 359 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 KRTCAP3Q53RY4 240 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 GFI1BQ5VTD9 330 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 OR4A47Q6IF82 309 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 NUP37Q8NFH4 326 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 C11orf52Q96A22 123 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 PCGF1Q9BSM1 259 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 SAA2-SAA4A0A096LPE2 208 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 A0A1W2PPQ1 181 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 SPRY3O43610 288 aa19.11■□□□□ 0.65
FOXA1-202ENST00000545425 SAA2P0DJI9 122 aaPredicted RBP19.11■□□□□ 0.65
FOXA1-202ENST00000545425 CEACAM8P31997 349 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms