RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CKS2P33552 79 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 NUTF2P61970 127 aaKnown RBP16.39■□□□□ 0.21
SUDS3-204ENST00000543473 PCOLCEQ15113 449 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 JPT1Q9UK76 154 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 SCN8AQ9UQD0 1980 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 COX6A1P12074 109 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 ADMP35318 185 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 SCNM1Q9BWG6 230 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 AKIRIN1Q9H9L7 192 aaPredicted RBP16.39■□□□□ 0.21
SUDS3-204ENST00000543473 C17orf98A8MV24 154 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 KIR2DL2P43627 348 aaPredicted RBP16.39■□□□□ 0.21
SUDS3-204ENST00000543473 RPL27AP46776 148 aaKnown RBP16.39■□□□□ 0.21
SUDS3-204ENST00000543473 HCP5Q6MZN7 132 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 CCL13Q99616 98 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 WDR81Q562E7 1941 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 CACNA1HO95180 2353 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 TMEM189A5PLL7 270 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 C12orf77C9JDV5 145 aa16.39■□□□□ 0.21
SUDS3-204ENST00000543473 ZNF324BQ6AW86 544 aaPredicted RBP16.39■□□□□ 0.21
SUDS3-204ENST00000543473 NAPSAO96009 420 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 LIPFP07098 398 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 HERVK_113P61574 105 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 KCNS1Q96KK3 526 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 CHCHD2Q9Y6H1 151 aaPredicted RBP16.38■□□□□ 0.21
SUDS3-204ENST00000543473 MPDZO75970 2070 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 NIT1Q86X76 327 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 OR4A8P0C604 315 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 HBBP68871 147 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 ST6GALNAC6Q969X2 333 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 VSIRQ9H7M9 311 aa16.38■□□□□ 0.21
SUDS3-204ENST00000543473 C9JQL5 133 aa16.37■□□□□ 0.21
SUDS3-204ENST00000543473 TWIST1Q15672 202 aa16.37■□□□□ 0.21
SUDS3-204ENST00000543473 MST1LQ2TV78 715 aa16.37■□□□□ 0.21
SUDS3-204ENST00000543473 LEAP2Q969E1 77 aa16.37■□□□□ 0.21
SUDS3-204ENST00000543473 ALKBH7Q9BT30 221 aaPredicted RBP16.37■□□□□ 0.21
SUDS3-204ENST00000543473 SLC25A10Q9UBX3 287 aaPredicted RBP16.37■□□□□ 0.21
SUDS3-204ENST00000543473 TMEM105Q8N8V8 129 aa16.37■□□□□ 0.21
SUDS3-204ENST00000543473 SRSF12Q8WXF0 261 aaKnown RBP16.37■□□□□ 0.21
SUDS3-204ENST00000543473 SMIM12Q96EX1 92 aa16.37■□□□□ 0.21
SUDS3-204ENST00000543473 H3BVH4 76 aa16.37■□□□□ 0.21
SUDS3-204ENST00000543473 KLF14Q8TD94 323 aaPredicted RBP16.37■□□□□ 0.21
SUDS3-204ENST00000543473 CEACAM1P13688 526 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 FAM214BQ7L5A3 538 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 MRPL32Q9BYC8 188 aaKnown RBP16.36■□□□□ 0.21
SUDS3-204ENST00000543473 MS4A5Q9H3V2 200 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 RALYQ9UKM9 306 aaKnown RBP16.36■□□□□ 0.21
SUDS3-204ENST00000543473 A0A1W2PRD5 423 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 A0A1W2PRF3 423 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 A0A1W2PRM7 423 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 CD55P08174 381 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 PCSK4Q6UW60 755 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 BEND2Q8NDZ0 799 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 REPIN1Q9BWE0 567 aaKnown RBP16.36■□□□□ 0.21
SUDS3-204ENST00000543473 AP5S1Q9NUS5 200 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 RFNGQ9Y644 331 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 CTSSP25774 331 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 TFPI2P48307 235 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 ATP1A1-AS1Q5TC04 95 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 PMCHL2Q9BQD1 86 aa16.36■□□□□ 0.21
SUDS3-204ENST00000543473 TRAV1-1A0A0B4J248 108 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 PGPEP1LA6NFU8 196 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 GDF9O60383 454 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 ZNF146Q15072 292 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 C1orf174Q8IYL3 243 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 RSPO3Q9BXY4 272 aaPredicted RBP16.35■□□□□ 0.21
SUDS3-204ENST00000543473 C2orf88Q9BSF0 95 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 C1QTNF5Q9BXJ0 243 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 MGAMO43451 1857 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 SLC25A53Q5H9E4 307 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 CDCP2Q5VXM1 449 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 NPIPB3Q92617 1050 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 ESPL1Q14674 2120 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 A6NNC1 897 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 H3BTX0 84 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 LYL1P12980 280 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 SHISA5Q8N114 240 aa16.35■□□□□ 0.21
SUDS3-204ENST00000543473 ARF6P62330 175 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 ZNF841Q6ZN19 808 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 RTN4RL2Q86UN3 420 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 GRAMD2BQ96HH9 432 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 HES7Q9BYE0 225 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 F11RQ9Y624 299 aaKnown RBP16.34■□□□□ 0.21
SUDS3-204ENST00000543473 ZNF318Q5VUA4 2279 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 CCL8P80075 99 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 MMDQ15546 238 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 ITLN1Q8WWA0 313 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 CLDN16Q9Y5I7 305 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 IGHV3-48P01763 117 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 ZNF883P0CG24 379 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 IGFBP2P18065 325 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 ZNF714Q96N38 554 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 DMRTA2Q96SC8 542 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 ZNF716A6NP11 495 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 WNT9BO14905 357 aa16.34■□□□□ 0.21
SUDS3-204ENST00000543473 PPIHO43447 177 aaKnown RBP16.34■□□□□ 0.21
SUDS3-204ENST00000543473 FNDC1Q4ZHG4 1894 aaPredicted RBP16.33■□□□□ 0.21
SUDS3-204ENST00000543473 IGHV3-72A0A0B4J1Y9 119 aa16.33■□□□□ 0.21
SUDS3-204ENST00000543473 TBR1Q16650 682 aa16.33■□□□□ 0.21
SUDS3-204ENST00000543473 RPL39P5Q59GN2 51 aa16.33■□□□□ 0.21
SUDS3-204ENST00000543473 SPANXN1Q5VSR9 72 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms