RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ONECUT1Q9UBC0 465 aa7.59□□□□□ -1.19
GNE-206ENST00000543356 CACFD1Q9UGQ2 172 aa7.59□□□□□ -1.19
GNE-206ENST00000543356 LRBAP50851 2863 aa7.59□□□□□ -1.19
GNE-206ENST00000543356 FAM24AA6NFZ4 105 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 DLEU1O43261 78 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 JTBO76095 146 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 HRASP01112 189 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 UBE2KP61086 200 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 RBX1P62877 108 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 HLA-DRB5Q30154 266 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 PDLIM3Q53GG5 364 aaPredicted RBP7.59□□□□□ -1.2
GNE-206ENST00000543356 THNSL2Q86YJ6 484 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 Q8N7P7 452 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 C15orf54Q8N8G6 183 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 NABP2Q9BQ15 211 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 RBKSQ9H477 322 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 TMEM140Q9NV12 185 aa7.59□□□□□ -1.2
GNE-206ENST00000543356 AMMECR1Q9Y4X0 333 aaPredicted RBP7.59□□□□□ -1.2
GNE-206ENST00000543356 YLPM1P49750 1951 aaKnown RBP7.59□□□□□ -1.2
GNE-206ENST00000543356 H0YJW9 148 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 OR9G9P0C7N8 305 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 F2RL1P55085 397 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 RPL7L1Q6DKI1 246 aaKnown RBP7.58□□□□□ -1.2
GNE-206ENST00000543356 WDR73Q6P4I2 378 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 UBAC2Q8NBM4 344 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 OR52E5Q8NH55 327 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 ARV1Q9H2C2 271 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 ABCA4P78363 2273 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 TSTD3H0UI37 97 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 NDUFS8O00217 210 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 ENSAO43768 121 aaKnown RBP7.58□□□□□ -1.2
GNE-206ENST00000543356 HOXA5P20719 270 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 RAB5CP51148 216 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 RELBQ01201 579 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 TMEM177Q53S58 311 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 PDPNQ86YL7 162 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 OR13D1Q8NGV5 346 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 OSR1Q8TAX0 266 aaPredicted RBP7.58□□□□□ -1.2
GNE-206ENST00000543356 BPESC1Q9GZL8 116 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 PSENENQ9NZ42 101 aa7.58□□□□□ -1.2
GNE-206ENST00000543356 SPTBN1Q01082 2364 aaKnown RBP7.57□□□□□ -1.2
GNE-206ENST00000543356 BORCS7-ASMTA0A0B4J1R7 106 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 IL6RP08887 468 aaPredicted RBP7.57□□□□□ -1.2
GNE-206ENST00000543356 IAPPP10997 89 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 SULT1A1P50225 295 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 OR2B8PP59922 312 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 SP5Q6BEB4 398 aaPredicted RBP7.57□□□□□ -1.2
GNE-206ENST00000543356 OR4A47Q6IF82 309 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 ZNF429Q86V71 674 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 OR11H6Q8NGC7 330 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 OR4A16Q8NH70 328 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 CLDND2Q8NHS1 167 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 CIB3Q96Q77 187 aaPredicted RBP7.57□□□□□ -1.2
GNE-206ENST00000543356 QTRT1Q9BXR0 403 aaKnown RBP7.57□□□□□ -1.2
GNE-206ENST00000543356 SMIM3Q9BZL3 60 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 WFDC1Q9HC57 220 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 C15orf61A6NNL5 157 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 BUB1B-PAK6H3BSN5 160 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 PRTN3P24158 256 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 LMO4P61968 165 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 PAX2Q02962 417 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 EIF5AL1Q6IS14 154 aaKnown RBP7.57□□□□□ -1.2
GNE-206ENST00000543356 VKORC1L1Q8N0U8 176 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 OR10D4PQ8NGN7 298 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 PIMREGQ9BSJ6 248 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 SMCO4Q9NRQ5 59 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 FOXA2Q9Y261 457 aaPredicted RBP7.57□□□□□ -1.2
GNE-206ENST00000543356 WASHC3Q9Y3C0 194 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 KPTNQ9Y664 436 aa7.57□□□□□ -1.2
GNE-206ENST00000543356 DCHS2Q6V1P9 2916 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 KMT2BQ9UMN6 2715 aaPredicted RBP7.56□□□□□ -1.2
GNE-206ENST00000543356 A8MWP6 167 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 RBMXL2O75526 392 aaKnown RBP7.56□□□□□ -1.2
GNE-206ENST00000543356 IGKV1-16P04430 117 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 ZFP36P26651 326 aaKnown RBP7.56□□□□□ -1.2
GNE-206ENST00000543356 MC5RP33032 325 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 REG1BP48304 166 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 DYNLT3P51808 116 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 DIAPH2-AS1Q14236 149 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 ZNF266Q14584 549 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 OR4P4Q8NGL7 312 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 ISOC2Q96AB3 205 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 SEC11CQ9BY50 192 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 BET1LQ9NYM9 111 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 USF3Q68DE3 2245 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 ZNF462Q96JM2 2506 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 IGHV2-70DA0A0C4DH43 119 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 VWC2LB2RUY7 222 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 H3BP45 60 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 LY6LH3BQJ8 138 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 MT-ND4LP03901 98 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 COX7A1P24310 79 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 CDX1P47902 265 aaPredicted RBP7.56□□□□□ -1.2
GNE-206ENST00000543356 ARF6P62330 175 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 DMRTA1Q5VZB9 504 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 TMEM14EPQ6UXP3 125 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 PNKDQ8N490 385 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 OR5C1Q8NGR4 320 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 C10orf105Q8TEF2 133 aa7.56□□□□□ -1.2
GNE-206ENST00000543356 FAM168AQ92567 244 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms