RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SRRM5B3KS81 715 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 SPINT2O43291 252 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 HPRT1P00492 218 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 CRYAAP02489 173 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 RPL23P62829 140 aaKnown RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 CATR1Q13166 79 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 ACOT6Q3I5F7 207 aaPredicted RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 RPUSD4Q96CM3 377 aaKnown RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
DDX55-209ENST00000542286 SPTBN4Q9H254 2564 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 PTPRQQ9UMZ3 2332 aa12.22□□□□□ -0.45
DDX55-209ENST00000542286 ZNF705FA8MVS1 300 aaPredicted RBP12.21□□□□□ -0.45
DDX55-209ENST00000542286 ZNF705DP0CH99 300 aaPredicted RBP12.21□□□□□ -0.45
DDX55-209ENST00000542286 ZNF705BP0CI00 300 aaPredicted RBP12.21□□□□□ -0.45
DDX55-209ENST00000542286 OR10J1P30954 320 aa12.21□□□□□ -0.45
DDX55-209ENST00000542286 LHX4Q969G2 390 aa12.21□□□□□ -0.45
DDX55-209ENST00000542286 DIRC2Q96SL1 478 aa12.21□□□□□ -0.45
DDX55-209ENST00000542286 PLXNB1O43157 2135 aa12.21□□□□□ -0.45
DDX55-209ENST00000542286 RAI1Q7Z5J4 1906 aaPredicted RBP12.21□□□□□ -0.45
DDX55-209ENST00000542286 PMS2P5A8MQ11 134 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 CEACAM4O75871 244 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 MMP23AO75900 390 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 HRASP01112 189 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 DUTP33316 252 aaKnown RBP12.21□□□□□ -0.46
DDX55-209ENST00000542286 GNG10P50151 68 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 KLF3P57682 345 aaPredicted RBP12.21□□□□□ -0.46
DDX55-209ENST00000542286 MORN2Q502X0 79 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 FAM216BQ8N7L0 139 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 PRR7Q8TB68 274 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 OR6C3Q9NZP0 311 aa12.21□□□□□ -0.46
DDX55-209ENST00000542286 CLDN14O95500 239 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 CNN1P51911 297 aaKnown RBP12.2□□□□□ -0.46
DDX55-209ENST00000542286 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
DDX55-209ENST00000542286 OR2T10Q8NGZ9 312 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 TBX15Q96SF7 602 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 CCL13Q99616 98 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 IFNA1P01562 189 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 CCL8P80075 99 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 PRSS33Q8NF86 280 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 MS4A10Q96PG2 267 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 SLC39A9Q9NUM3 307 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 AURKAIP1Q9NWT8 199 aaPredicted RBP12.2□□□□□ -0.46
DDX55-209ENST00000542286 COL12A1Q99715 3063 aa12.2□□□□□ -0.46
DDX55-209ENST00000542286 KBTBD11O94819 623 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 GYPAP02724 150 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 WNT2P09544 360 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 LOXL3P58215 753 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 MSMO1Q15800 293 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 TMEM41BQ5BJD5 291 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 FFAR4Q5NUL3 377 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 ABHD12Q8N2K0 398 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 SDSLQ96GA7 329 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 LPAR2Q9HBW0 351 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 DYSFO75923 2080 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 DSCAML1Q8TD84 2053 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 PRAMEF5Q5TYX0 476 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 FAM90A1Q86YD7 464 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 OR5T1Q8NG75 326 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 TMEM204Q9BSN7 226 aa12.19□□□□□ -0.46
DDX55-209ENST00000542286 TRAV38-1A0A0B4J264 116 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 A0A1B0GUS0 222 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 RRHO14718 337 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 BRS3P32247 399 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
DDX55-209ENST00000542286 BATFQ16520 125 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 Q6ZS92 163 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 CISD2Q8N5K1 135 aaKnown RBP12.18□□□□□ -0.46
DDX55-209ENST00000542286 OR10P1Q8NGE3 313 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 IFI27L2Q9H2X8 130 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 CHD8Q9HCK8 2581 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 NUPR1O60356 82 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 CD33P20138 364 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 PRR30Q53SZ7 412 aaPredicted RBP12.18□□□□□ -0.46
DDX55-209ENST00000542286 C1orf185Q5T7R7 199 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 CST9LP1Q5W188 147 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 ABCA1O95477 2261 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 TDRG1Q3Y452 100 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 WFDC8Q8IUA0 241 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 FAM122AQ96E09 287 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 HINT2Q9BX68 163 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 NPCDR1Q9BY65 106 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 PATZ1Q9HBE1 687 aaKnown RBP12.18□□□□□ -0.46
DDX55-209ENST00000542286 GCM1Q9NP62 436 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 CALYQ9NYX4 217 aa12.18□□□□□ -0.46
DDX55-209ENST00000542286 UBE2G2P60604 165 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 TIMM23BQ5SRD1 257 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 PSMG3Q9BT73 122 aaPredicted RBP12.17□□□□□ -0.46
DDX55-209ENST00000542286 PARLQ9H300 379 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 NAV3Q8IVL0 2385 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 RAB29O14966 203 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 IGHV1-46P01743 117 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 TYMSP04818 313 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 OR5I1Q13606 314 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 C17orf58Q2M2W7 97 aa12.17□□□□□ -0.46
DDX55-209ENST00000542286 CT45A1Q5HYN5 189 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms