RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 Q6ZN92 141 aa14.6□□□□□ -0.07
RAB40C-205ENST00000539661 OR4A16Q8NH70 328 aa14.6□□□□□ -0.07
RAB40C-205ENST00000539661 DIDO1Q9BTC0 2240 aaKnown RBP14.6□□□□□ -0.07
RAB40C-205ENST00000539661 EP300Q09472 2414 aaPredicted RBP14.6□□□□□ -0.07
RAB40C-205ENST00000539661 FAM173AQ9BQD7 235 aa14.6□□□□□ -0.07
RAB40C-205ENST00000539661 GFRA3O60609 400 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 HLA-DQA1P01909 254 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 KLF3P57682 345 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-205ENST00000539661 AESQ08117 197 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 TBC1D28Q2M2D7 210 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 PRAMEF5Q5TYX0 476 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 PRAMEF6Q5VXH4 476 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 FAM53AQ6NSI3 398 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-205ENST00000539661 PRR7Q8TB68 274 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 FAM216AQ8WUB2 273 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 MRPS16Q9Y3D3 137 aaKnown RBP14.59□□□□□ -0.07
RAB40C-205ENST00000539661 FRMD6-AS1P0C7T7 363 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 OTX2P32243 289 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 CEBPDP49716 269 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-205ENST00000539661 GNG4P50150 75 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 ZNF83P51522 516 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 COQ2Q96H96 371 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 GAL3ST2Q9H3Q3 398 aa14.59□□□□□ -0.07
RAB40C-205ENST00000539661 SLC25A10Q9UBX3 287 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-205ENST00000539661 DPRXA6NFQ7 191 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 RAB31Q13636 194 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 TMPRSS7Q7RTY8 843 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 MDP1Q86V88 176 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 GCNT2Q8N0V5 402 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 MRGPRDQ8TDS7 321 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 BCL2L2Q92843 193 aaPredicted RBP14.58□□□□□ -0.08
RAB40C-205ENST00000539661 TRGV8A0A0C4DH27 118 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 HELTA6NFD8 242 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 AMY1AP04745 511 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 ADH4P08319 380 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 DUTP33316 252 aaKnown RBP14.58□□□□□ -0.08
RAB40C-205ENST00000539661 GABRA2P47869 451 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 ZXDAP98168 799 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 FOXF2Q12947 444 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 MRPL49Q13405 166 aaKnown RBP14.58□□□□□ -0.08
RAB40C-205ENST00000539661 LYSMD4Q5XG99 296 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 LEMD1Q68G75 181 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 TRAT1Q6PIZ9 186 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 TEPPQ6URK8 271 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 TIPARPQ7Z3E1 657 aaKnown RBP14.58□□□□□ -0.08
RAB40C-205ENST00000539661 SEPSECSQ9HD40 501 aaKnown RBP14.58□□□□□ -0.08
RAB40C-205ENST00000539661 PSG11Q9UQ72 335 aa14.58□□□□□ -0.08
RAB40C-205ENST00000539661 NTN3O00634 580 aaPredicted RBP14.57□□□□□ -0.08
RAB40C-205ENST00000539661 TNFSF15O95150 251 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 TOMM40O96008 361 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 C3orf79P0CE67 100 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 PMCHP20382 165 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 PMCHL1Q16048 86 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 CENPWQ5EE01 88 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 STPG3Q8N7X2 389 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 OR5B3Q8NH48 314 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 C1orf159Q96HA4 380 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 IQCF6A8MYZ5 107 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 PTTG1IPP53801 180 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 NIT1Q86X76 327 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 TMEM167BQ9NRX6 74 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 MRPL27Q9P0M9 148 aaKnown RBP14.57□□□□□ -0.08
RAB40C-205ENST00000539661 IL19Q9UHD0 177 aa14.57□□□□□ -0.08
RAB40C-205ENST00000539661 NKX6-3A6NJ46 265 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 ISLRO14498 428 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 SMPD2O60906 423 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 GRPP07492 148 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 ERVK-16P61578 105 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 MORN2Q502X0 79 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 SSMEM1Q8WWF3 244 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 RCHY1Q96PM5 261 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 SP1P08047 785 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 LINC00205P59089 165 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 TIGITQ495A1 244 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 SPATA31B1PQ5VZV4 182 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 SPINK14Q6IE38 97 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 OR2D3Q8NGH3 330 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 BORCS7Q96B45 105 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 PTPRBP23467 1997 aa14.56□□□□□ -0.08
RAB40C-205ENST00000539661 BMPR1BO00238 502 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 CCL25O15444 150 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 SPINT2O43291 252 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 FCGR3BO75015 233 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 CELA3AP09093 270 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 GPR12P47775 334 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 GNG10P50151 68 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 DEFB123Q8N688 67 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 OR4P4Q8NGL7 312 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 CORO2AQ92828 525 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 SLC35D1Q9NTN3 355 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 FNDC10F2Z333 226 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 K7EP13 123 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 ITGB1BP1O14713 200 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 SRIP30626 198 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 RELBQ01201 579 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 UBE2V1Q13404 147 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 BET1LQ9NYM9 111 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 CDC42EP3Q9UKI2 254 aa14.55□□□□□ -0.08
RAB40C-205ENST00000539661 SMIM27A0A1W2PRY6 76 aa14.54□□□□□ -0.08
RAB40C-205ENST00000539661 FOXH1O75593 365 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms