RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 KCNS1Q96KK3 526 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 CENPWQ5EE01 88 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 PNKDQ8N490 385 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 TTC9CQ8N5M4 171 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 GPHA2Q96T91 129 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 LHFPL6Q9Y693 200 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 H3BTX0 84 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 WISP3O95389 354 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-208ENST00000538570 C1QCP02747 245 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 TDGF1P3P51864 188 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 ZNF818PQ6ZRF7 136 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 Q96M66 194 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 PCM1Q15154 2024 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 NPIPB11E5RHQ5 1161 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 PTGDSP41222 190 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 C2orf68Q2NKX9 166 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 ZNF562Q6V9R5 426 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 OR9G1Q8NH87 305 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 SEPSECSQ9HD40 501 aaKnown RBP8.49□□□□□ -1.05
COL4A6-208ENST00000538570 TRIP11Q15643 1979 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 LAMB2P55268 1798 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 A0A0G2JMM0 328 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 A0A1W2PPB8 328 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 KIR3DP1A8MWS1 328 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 C5orf67F2Z3F1 127 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 CA7P43166 264 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 ZP1P60852 638 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 CST9LQ9H4G1 147 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 TRAV8-6A0A0B4J262 113 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 ZIC3O60481 467 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-208ENST00000538570 CD200R1LQ6Q8B3 271 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 FAM181AQ8N9Y4 354 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 FBLIM1Q8WUP2 373 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 CFHR5Q9BXR6 569 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 SCN1AP35498 2009 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM50AO95807 157 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 IGHV4-39P01824 125 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 FOXL2P58012 376 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 LEAP2Q969E1 77 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 A0A087WWC5 75 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 FOXI3A8MTJ6 420 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-208ENST00000538570 PRTN3P24158 256 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 IMMP2LQ96T52 175 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 SSBP3Q9BWW4 388 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-208ENST00000538570 ARID1AO14497 2285 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 A0A1W2PQF6 199 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 PGPEP1LA6NFU8 196 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 VENTXO95231 258 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 LINC00305Q7Z4B0 112 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 CLEC7AQ9BXN2 247 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 TUBA4BQ9H853 241 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 PILRAQ9UKJ1 303 aa8.48□□□□□ -1.05
COL4A6-208ENST00000538570 LOC105371242A0A075B767 164 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 IGKV1-8A0A0C4DH67 115 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 VKORC1L1Q8N0U8 176 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 NPIPB3Q92617 1050 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 SDHCQ99643 169 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-208ENST00000538570 TRAV8-1A0A0A6YYK1 113 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 UNQ9370/PRO34162Q6UXP9 181 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 CYP2G1PQ6ZSU1 146 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 KLF14Q8TD94 323 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-208ENST00000538570 A8MWV9 139 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 CD8AP01732 235 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 UCP1P25874 307 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 CACNG7P62955 275 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 LY6EQ16553 131 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 ZFC3H1O60293 1989 aaKnown RBP8.47□□□□□ -1.05
COL4A6-208ENST00000538570 RRHO14718 337 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 ABCA3Q99758 1704 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 NPSP0C0P6 89 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 GATAD1Q8WUU5 269 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 SCN3AQ9NY46 2000 aa8.47□□□□□ -1.05
COL4A6-208ENST00000538570 H7C1H1 209 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.05
COL4A6-208ENST00000538570 TNFRSF6BO95407 300 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 SMRP1Q8NCR6 262 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 CLDND2Q8NHS1 167 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 MGST2Q99735 147 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 PSMB11A5LHX3 300 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM250H0YL14 139 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 CEACAM4O75871 244 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 PEAR1Q5VY43 1037 aaPredicted RBP8.46□□□□□ -1.05
COL4A6-208ENST00000538570 TCF23Q7RTU1 214 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 DRAM1Q8N682 238 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 PRDM13Q9H4Q3 707 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 NHP2Q9NX24 153 aaKnown RBP8.46□□□□□ -1.05
COL4A6-208ENST00000538570 IGHMP01871 453 aa8.46□□□□□ -1.05
COL4A6-208ENST00000538570 KNTC1P50748 2209 aa8.46□□□□□ -1.06
COL4A6-208ENST00000538570 PIN1P1O15428 100 aa8.46□□□□□ -1.06
COL4A6-208ENST00000538570 RAMP1O60894 148 aa8.46□□□□□ -1.06
COL4A6-208ENST00000538570 IL6RP08887 468 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-208ENST00000538570 AICDAQ9GZX7 198 aa8.46□□□□□ -1.06
COL4A6-208ENST00000538570 GP6Q9HCN6 339 aa8.46□□□□□ -1.06
COL4A6-208ENST00000538570 SMCHD1A6NHR9 2005 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms