RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 IGHG2P01859 326 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 RPL8P62917 257 aaKnown RBP13.59□□□□□ -0.23
CTSB-229ENST00000533572 OXA1LQ15070 435 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 PRSS8Q16651 343 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 SLC35E3Q7Z769 313 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 VKORC1L1Q8N0U8 176 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 FAM110DQ8TAY7 271 aaPredicted RBP13.59□□□□□ -0.23
CTSB-229ENST00000533572 GON7Q9BXV9 100 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 WNT10AQ9GZT5 417 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 ZNF580Q9UK33 172 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 CA2P00918 260 aa13.58□□□□□ -0.24
CTSB-229ENST00000533572 CD28P10747 220 aa13.58□□□□□ -0.24
CTSB-229ENST00000533572 NSUN5P1Q3KNT7 163 aa13.58□□□□□ -0.24
CTSB-229ENST00000533572 SLC35G3Q8N808 338 aa13.58□□□□□ -0.24
CTSB-229ENST00000533572 OR4A16Q8NH70 328 aa13.58□□□□□ -0.24
CTSB-229ENST00000533572 LHFPL5Q8TAF8 219 aa13.58□□□□□ -0.24
CTSB-229ENST00000533572 ZNF430Q9H8G1 570 aaPredicted RBP13.58□□□□□ -0.24
CTSB-229ENST00000533572 AP4M1O00189 453 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 CNIH1O95406 144 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 IFNA21P01568 189 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 HLA-GP17693 338 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 CX3CL1P78423 397 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 TMEM267Q0VDI3 215 aaPredicted RBP13.57□□□□□ -0.24
CTSB-229ENST00000533572 ANKRD55Q3KP44 614 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 THOC7Q6I9Y2 204 aaKnown RBP13.57□□□□□ -0.24
CTSB-229ENST00000533572 C12orf45Q8N5I9 185 aaPredicted RBP13.57□□□□□ -0.24
CTSB-229ENST00000533572 OR5AU1Q8NGC0 362 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 OR4X2Q8NGF9 303 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 CHPT1Q8WUD6 406 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 RBMXL1Q96E39 390 aaKnown RBP13.57□□□□□ -0.24
CTSB-229ENST00000533572 TMEM68Q96MH6 324 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 CLCC1Q96S66 551 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 SPIN2AQ99865 258 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 SPIN2BQ9BPZ2 258 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 COMMD5Q9GZQ3 224 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 OR51J1Q9H342 316 aa13.57□□□□□ -0.24
CTSB-229ENST00000533572 IGHV7-81A0A0B4J1V7 117 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 IGKV1-5P01602 117 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 IGF1P05019 195 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 P0C879 139 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 SLC25A6P12236 298 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 FXYD3Q14802 87 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 TNXAQ16473 311 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 HIST2H2BDQ6DRA6 164 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 ZNF429Q86V71 674 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 NDUFA11Q86Y39 141 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 OR5B3Q8NH48 314 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 ARPC1AQ92747 370 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 TPSG1Q9NRR2 321 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 COA4Q9NYJ1 87 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 ZNF257Q9Y2Q1 563 aa13.56□□□□□ -0.24
CTSB-229ENST00000533572 A0A1B0GU03 582 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 C15orf61A6NNL5 157 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 FCN1O00602 326 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 RBMXL2O75526 392 aaKnown RBP13.55□□□□□ -0.24
CTSB-229ENST00000533572 OPN1MWP04001 364 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 OPN1MW2P0DN77 364 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 OPN1MW3P0DN78 364 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 SPNP16150 400 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 CRIP2P52943 208 aaPredicted RBP13.55□□□□□ -0.24
CTSB-229ENST00000533572 KHDC1LQ5JSQ8 128 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 LYZL2Q7Z4W2 148 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 HSD17B13Q7Z5P4 300 aaPredicted RBP13.55□□□□□ -0.24
CTSB-229ENST00000533572 MRPL41Q8IXM3 137 aaKnown RBP13.55□□□□□ -0.24
CTSB-229ENST00000533572 OR52B4Q8NGK2 314 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 CITED2Q99967 270 aaPredicted RBP13.55□□□□□ -0.24
CTSB-229ENST00000533572 SRSF8Q9BRL6 282 aaKnown RBP13.55□□□□□ -0.24
CTSB-229ENST00000533572 SEC22CQ9BRL7 303 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 PDCD10Q9BUL8 212 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.55□□□□□ -0.24
CTSB-229ENST00000533572 FOXA2Q9Y261 457 aaPredicted RBP13.55□□□□□ -0.24
CTSB-229ENST00000533572 MEGF8Q7Z7M0 2845 aa13.55□□□□□ -0.24
CTSB-229ENST00000533572 PSMB11A5LHX3 300 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 SULT1A3P0DMM9 295 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 SULT1A4P0DMN0 295 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 RPL27AP46776 148 aaKnown RBP13.54□□□□□ -0.24
CTSB-229ENST00000533572 GNB1P62873 340 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 TATDN3Q17R31 274 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 MRGPRG-AS1Q2M3A8 158 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 NMSQ5H8A3 153 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 OR4F17Q8NGA8 305 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 OR1L8Q8NGR8 309 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 WIPF2Q8TF74 440 aaPredicted RBP13.54□□□□□ -0.24
CTSB-229ENST00000533572 SRSF12Q8WXF0 261 aaKnown RBP13.54□□□□□ -0.24
CTSB-229ENST00000533572 GPR146Q96CH1 333 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 OR4F4Q96R69 305 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 HSPB9Q9BQS6 159 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 TMEM14BQ9NUH8 114 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 PRR13Q9NZ81 148 aa13.54□□□□□ -0.24
CTSB-229ENST00000533572 TCRBV4S1A1TA0A5B7 111 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 C7orf66A4D0T2 115 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 DBX1A6NMT0 343 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 HOXB5P09067 269 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 OR9G9P0C7N8 305 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 SLC35B1P78383 322 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 PJVKQ0ZLH3 352 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 SMCO1Q147U7 214 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 AKIRIN2Q53H80 203 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 OR52E5Q8NH55 327 aa13.53□□□□□ -0.24
CTSB-229ENST00000533572 ABHD5Q8WTS1 349 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms