RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 IGKV1D-17A0A075B6S4 117 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 A8MWP6 167 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 F6UZH7 168 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.364e-6■■■■□ 21.5
USP35-206ENST00000530535 GCGP01275 180 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 CR1LQ2VPA4 569 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 PRAMEF5Q5TYX0 476 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 SSX9Q7RTT3 188 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 VKORC1L1Q8N0U8 176 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 PLPPR2Q96GM1 343 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 IMMP2LQ96T52 175 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 MS4A5Q9H3V2 200 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 JPT1Q9UK76 154 aa12.82□□□□□ -0.36
USP35-206ENST00000530535 ZGRF1Q86YA3 2104 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 TRAV3A0A0B4J244 114 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 A0A1B0GV90 55 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 STAG3L2P0CL84 134 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 STAG3L3P0CL85 134 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 ARL14EPLP0DKL9 152 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 LOXL3P58215 753 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 RELBQ01201 579 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 RBPJQ06330 500 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 RPL39P5Q59GN2 51 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 SFXN3Q9BWM7 321 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 IFI27L2Q9H2X8 130 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 TUBG2Q9NRH3 451 aa12.81□□□□□ -0.36
USP35-206ENST00000530535 RP1L1Q8IWN7 2480 aaPredicted RBP12.81□□□□□ -0.36
USP35-206ENST00000530535 IGHV2OR16-5A0A0B4J2B6 119 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 M0R1X1 148 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 SFTPCP11686 197 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 HOXC12P31275 282 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 CNN1P51911 297 aaKnown RBP12.8□□□□□ -0.36
USP35-206ENST00000530535 ZNF134P52741 427 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 ZNF718Q3SXZ3 478 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 C1orf229Q6ZS94 237 aaPredicted RBP12.8□□□□□ -0.36
USP35-206ENST00000530535 LSM4Q9Y4Z0 139 aaKnown RBP12.8□□□□□ -0.36
USP35-206ENST00000530535 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 A0A1W2PPV4 95 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 SRRM5B3KS81 715 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 YPEL1O60688 119 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 FOXL1Q12952 345 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 MSMPQ1L6U9 139 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 OR4A16Q8NH70 328 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 FAM216AQ8WUB2 273 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 DDB2Q92466 427 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 YPEL2Q96QA6 119 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 GNG12Q9UBI6 72 aa12.8□□□□□ -0.36
USP35-206ENST00000530535 SSX2Q16385 188 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 UTF1Q5T230 341 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 TMEM18Q96B42 140 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 SFRP2Q96HF1 295 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 FAM234AQ9H0X4 552 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 ELOVL5Q9NYP7 299 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 SH3BGRL2Q9UJC5 107 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 F2RL2O00254 374 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 GCH1P30793 250 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
USP35-206ENST00000530535 LY6DQ14210 128 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 ZNF474Q6S9Z5 364 aaPredicted RBP12.79□□□□□ -0.36
USP35-206ENST00000530535 ABHD12Q8N2K0 398 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 NOL4LQ96MY1 436 aaPredicted RBP12.79□□□□□ -0.36
USP35-206ENST00000530535 HEYLQ9NQ87 328 aaPredicted RBP12.79□□□□□ -0.36
USP35-206ENST00000530535 TMEM140Q9NV12 185 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 DUSP13Q9UII6 198 aa12.79□□□□□ -0.36
USP35-206ENST00000530535 SMG1Q96Q15 3661 aaKnown RBP12.78□□□□□ -0.36
USP35-206ENST00000530535 NBEAQ8NFP9 2946 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 A0A0G2JNJ9 132 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 A0A0U1RQK1 487 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 SCO2A0A1W2PP80 73 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 ZNF320A2RRD8 509 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 SLC31A2O15432 143 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 TXNDC17Q9BRA2 123 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 Q9UFV3 132 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 TCF19Q9Y242 345 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
USP35-206ENST00000530535 ATRXP46100 2492 aa12.78□□□□□ -0.36
USP35-206ENST00000530535 TRGV8A0A0C4DH27 118 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 MGST3O14880 152 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 CXorf1O96002 111 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 IGHV3-13P01766 116 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 IGHV3-7P01780 117 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 COL8A2P25067 703 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 CCKARP32238 428 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 SPRNQ5BIV9 151 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 BHLHA15Q7RTS1 189 aaPredicted RBP12.77□□□□□ -0.36
USP35-206ENST00000530535 GCSAMQ8N6F7 178 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 OR2Z1Q8NG97 314 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 TMEM204Q9BSN7 226 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 TRAPPC1Q9Y5R8 145 aa12.77□□□□□ -0.36
USP35-206ENST00000530535 A0A1B0GUS0 222 aa12.77□□□□□ -0.37
USP35-206ENST00000530535 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.37
USP35-206ENST00000530535 RNF224P0DH78 156 aa12.77□□□□□ -0.37
USP35-206ENST00000530535 ERVK-16P61578 105 aa12.77□□□□□ -0.37
USP35-206ENST00000530535 ARSJQ5FYB0 599 aaPredicted RBP12.77□□□□□ -0.37
USP35-206ENST00000530535 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms