RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 BOD1L1Q8NFC6 3051 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 IGHV1-18A0A0C4DH31 117 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 CBLN1P23435 193 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 LINC00310P59036 64 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 HES3Q5TGS1 186 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 DDB2Q92466 427 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 S1PR3Q99500 378 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 NPVFQ9HCQ7 196 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 CBLN4Q9NTU7 201 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 NAGKQ9UJ70 344 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 TNCP24821 2201 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 TANC2Q9HCD6 1990 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 SRRM5B3KS81 715 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 IGHG3P01860 377 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 MBNL2Q5VZF2 373 aaKnown RBP13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 LRP11Q86VZ4 500 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 STPG3Q8N7X2 389 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 MS4A10Q96PG2 267 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 SNHG12Q9BXW3 62 aa13.65□□□□□ -0.22
PCDHGA11-202ENST00000518882 PCNX2A6NKB5 2137 aa13.65□□□□□ -0.23
PCDHGA11-202ENST00000518882 A0A1B0GWJ7 208 aa13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 IGLV1-44P01699 117 aa13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 GCSAMQ8N6F7 178 aa13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 ATG101Q9BSB4 218 aa13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 F2RL2O00254 374 aa13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 MYOD1P15172 320 aa13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 NUTF2P61970 127 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 CR1LQ2VPA4 569 aa13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 C1orf194Q5T5A4 169 aa13.64□□□□□ -0.23
PCDHGA11-202ENST00000518882 ICE1Q9Y2F5 2266 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 TRGV8A0A0C4DH27 118 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 KIR2DL5BA0A0G2JN68 375 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 KIR2DL5BA0A0G2JPC4 375 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 C15orf61A6NNL5 157 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 MGST3O14880 152 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 ERVFC1-1P60608 527 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 ZNF90Q03938 601 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 TEPPQ6URK8 271 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 KIR2DL5AQ8N109 375 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 CMTM2Q8TAZ6 248 aa13.63□□□□□ -0.23
PCDHGA11-202ENST00000518882 SELENOTP62341 195 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 C1orf162Q8NEQ5 155 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 NEU1Q99519 415 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 OPN3Q9H1Y3 402 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 IL36BQ9NZH7 164 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 AHRRA9YTQ3 701 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 IGFBP2P18065 325 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 NPY1RP25929 384 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 SRSF6Q13247 344 aaKnown RBP13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 OR4A47Q6IF82 309 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 Q6ZWC4 215 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 SLC24A4Q8NFF2 622 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 OR4P4Q8NGL7 312 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 CALYQ9NYX4 217 aa13.62□□□□□ -0.23
PCDHGA11-202ENST00000518882 F2Z2F3 143 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 CA2P00918 260 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 CGAP01215 116 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 RHOBP62745 196 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 KRTCAP3Q53RY4 240 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 CT45A1Q5HYN5 189 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 CT45A3Q8NHU0 189 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 ZCCHC14Q8WYQ9 949 aaKnown RBP13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 C11orf52Q96A22 123 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 FAM122AQ96E09 287 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 MRPL18Q9H0U6 180 aaKnown RBP13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 CHODLQ9H9P2 273 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 SMG1Q96Q15 3661 aaKnown RBP13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 RAI1Q7Z5J4 1906 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 SAA2-SAA4A0A096LPE2 208 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 TCAPO15273 167 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 ACTL6BO94805 426 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 SAA2P0DJI9 122 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 OR10J1P30954 320 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 OR5I1Q13606 314 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 TDRG1Q3Y452 100 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 FAM201AQ5SY85 155 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 MIR17HGQ75NE6 70 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 OR4S2Q8NH73 311 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 EAF1Q96JC9 268 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 TBX15Q96SF7 602 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 TUBG2Q9NRH3 451 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 TMEM14BQ9NUH8 114 aa13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 YLPM1P49750 1951 aaKnown RBP13.61□□□□□ -0.23
PCDHGA11-202ENST00000518882 ZNF705FA8MVS1 300 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 ZNF705DP0CH99 300 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 ZNF705BP0CI00 300 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 RPL29P47914 159 aaKnown RBP13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 CCL11P51671 97 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 PRR20EP86478 221 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 PRR20CP86479 221 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 PRR20DP86480 221 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 PRR20BP86481 221 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 PRR20AP86496 221 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 C17orf58Q2M2W7 97 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 ALKBH2Q6NS38 261 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 FDCSPQ8NFU4 85 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 BDP1A6H8Y1 2624 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 SERF1AO75920 110 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms