RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 CCR2P41597 374 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 XCL1P47992 114 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 HBA1P69905 142 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 KRR1Q13601 381 aaKnown RBP1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 TEX36Q5VZQ5 186 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 OOSP2Q86WS3 158 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 LINC00304Q8N9R0 145 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 MRPL30Q8TCC3 161 aaKnown RBP1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 ZNF675Q8TD23 568 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 NEK7Q8TDX7 302 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 SMCR5Q8TEV8 140 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 CT55Q8WUE5 264 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 ANP32BQ92688 251 aaKnown RBP1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 PKMYT1Q99640 499 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 NIPSNAP1Q9BPW8 284 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 TM2D3Q9BRN9 247 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 COMMD5Q9GZQ3 224 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 FBXL12Q9NXK8 326 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 RSL24D1Q9UHA3 163 aaKnown RBP1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 ATPIF1Q9UII2 106 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 FUT9Q9Y231 359 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 TMEM56-RWDD3S4R434 201 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 LCTP09848 1927 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 ROBO3Q96MS0 1386 aa1.72□□□□□ -2.13
SCARNA15.2-201ENST00000516409 SHANK3Q9BYB0 1731 aa1.71□□□□□ -2.13
SCARNA15.2-201ENST00000516409 CACNA1SQ13698 1873 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 LTBP4Q8N2S1 1624 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 IGLV10-54A0A075B6I4 117 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 IGKV1D-17A0A075B6S4 117 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 hCG_1818297A0A087WSY0 165 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 IGKV1D-43A0A0B4J1Z2 117 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 IGKV2-24A0A0C4DH68 120 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 A0A0J9YX75 114 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 GGT3PA6NGU5 568 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 C11orf86A6NJI1 115 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 A8MT66 165 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 G3V3Q6 166 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 PIRO00625 290 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 LEPROTO15243 131 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 IGKV1-17P01599 117 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 LYG2Q86SG7 212 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 GDPD1Q8N9F7 314 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 CMTM2Q8TAZ6 248 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 VCX3BQ9H321 246 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 IL36BQ9NZH7 164 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 TP73-AS1Q9UF72 201 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 UTP11Q9Y3A2 253 aaKnown RBP1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 RBM7Q9Y580 266 aaKnown RBP1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 NCOA1Q15788 1441 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 NUP155O75694 1391 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 COL1A2P08123 1366 aa1.71□□□□□ -2.14
SCARNA15.2-201ENST00000516409 ITGB4P16144 1822 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 ATG2BQ96BY7 2078 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 EXOC1LA0A1B0GW35 172 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 H3BT86 120 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 PGRMC1O00264 195 aaKnown RBP1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 KLRC4O43908 158 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 ZNF682O95780 498 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 NPYP01303 97 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 PRM2P04554 102 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 ZNF728P0DKX0 622 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 SMIM17P0DL12 118 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 CCL5P13501 91 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 HLA-DMBP28068 263 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 CA5AP35218 305 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 CCL20P78556 96 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 FOXF1Q12946 379 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 C12orf74Q32Q52 190 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 ARHGAP11BQ3KRB8 267 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 C9orf64Q5T6V5 341 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 ZNF767PQ75MW2 155 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 SLC36A1Q7Z2H8 476 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 TMED4Q7Z7H5 227 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 IMMP2LQ96T52 175 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 OR8D2Q9GZM6 311 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 CCDC90BQ9GZT6 254 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 CYSLTR1Q9Y271 337 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 EIF3AQ14152 1382 aaKnown RBP1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 ZNF407Q9C0G0 2248 aa1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 DICER1Q9UPY3 1922 aaKnown RBP1.7□□□□□ -2.14
SCARNA15.2-201ENST00000516409 ZNF532Q9HCE3 1301 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 NUP160Q12769 1436 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 TRAV9-1A0A075B6T8 112 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 TMEM235A6NFC5 223 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 DPRXA6NFQ7 191 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 GNRH2O43555 120 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 S1PR2O95136 353 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 IGKV1-5P01602 117 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 C8GP07360 202 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 BPGMP07738 259 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 OR4E1P0C645 316 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 HIST1H2BOP23527 126 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 BLVRBP30043 206 aaPredicted RBP1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 HIST1H2BBP33778 126 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 HIST1H2BDP58876 126 aa1.69□□□□□ -2.14
SCARNA15.2-201ENST00000516409 AP1S1P61966 158 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms