RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 AMTP48728 403 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 LOXL3P58215 753 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 ELOBQ15370 118 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 UQCR10Q9UDW1 63 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 NAT8Q9UHE5 227 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 LIMS3P0CW19 117 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 LIMS4P0CW20 117 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 NPBWR1P48145 328 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 FAM3BP58499 235 aaPredicted RBP10.36□□□□□ -0.75
LIN54-210ENST00000510877 RPEL1Q2QD12 228 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 DMRTA1Q5VZB9 504 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 C8orf82Q6P1X6 216 aaPredicted RBP10.36□□□□□ -0.75
LIN54-210ENST00000510877 DPPA3Q6W0C5 159 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 TMEM191AQ9H0A3 160 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 ZNF107Q9UII5 783 aaPredicted RBP10.36□□□□□ -0.75
LIN54-210ENST00000510877 NAGKQ9UJ70 344 aa10.36□□□□□ -0.75
LIN54-210ENST00000510877 CFDP00746 253 aaPredicted RBP10.35□□□□□ -0.75
LIN54-210ENST00000510877 CD55P08174 381 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 CD24P25063 80 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 UBE2E1P51965 193 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 LINC01590Q5TEZ4 76 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 MYPOPQ86VE0 399 aaPredicted RBP10.35□□□□□ -0.75
LIN54-210ENST00000510877 DOK5Q9P104 306 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 MED12LQ86YW9 2145 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 SLC17A2O00624 439 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 CD8AP01732 235 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 SELLP14151 372 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 RBM11P57052 281 aaKnown RBP10.35□□□□□ -0.75
LIN54-210ENST00000510877 SGMS2Q8NHU3 365 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 NDUFAF3Q9BU61 184 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 TNFSF18Q9UNG2 199 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
LIN54-210ENST00000510877 IGHA1P01876 353 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 HLA-DQB1P01920 261 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 HBZP02008 142 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 DNM1P46Q6ZS02 220 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 HIST1H2BAQ96A08 127 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 DERL3Q96Q80 235 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 ATG101Q9BSB4 218 aa10.35□□□□□ -0.75
LIN54-210ENST00000510877 CARHSP1Q9Y2V2 147 aaKnown RBP10.35□□□□□ -0.75
LIN54-210ENST00000510877 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 ADAP1O75689 374 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 KRASP01116 189 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 ASPHD2Q6ICH7 369 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 SAXO1Q8IYX7 474 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 SEBOXQ9HB31 216 aaPredicted RBP10.34□□□□□ -0.75
LIN54-210ENST00000510877 SHANK1Q9Y566 2161 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 PGA5P0DJD9 388 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 ELLP55199 621 aaPredicted RBP10.34□□□□□ -0.75
LIN54-210ENST00000510877 PAX5Q02548 391 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 RELQ04864 619 aaPredicted RBP10.34□□□□□ -0.75
LIN54-210ENST00000510877 PNLIPRP3Q17RR3 467 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 OR4S2Q8NH73 311 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 ZNF2Q9BSG1 426 aaPredicted RBP10.34□□□□□ -0.75
LIN54-210ENST00000510877 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 PAM16Q9Y3D7 125 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 A0A0G2JLM5 398 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 H0Y8G0 127 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 CLEC3BP05452 202 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 SEC11BP0C7V7 166 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 HRH1P35367 487 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 UBE2G2P60604 165 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 KLF9Q13886 244 aaPredicted RBP10.34□□□□□ -0.75
LIN54-210ENST00000510877 H3BQ15 152 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 MLNRO43193 412 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 LYPD3O95274 346 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 SFT2D2O95562 160 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 IGFBP2P18065 325 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 PHLDA2Q53GA4 152 aa10.34□□□□□ -0.75
LIN54-210ENST00000510877 TNRC6BQ9UPQ9 1833 aaKnown RBP10.33□□□□□ -0.76
LIN54-210ENST00000510877 GAGE10A6NGK3 116 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 ZNF770Q6IQ21 691 aaPredicted RBP10.33□□□□□ -0.76
LIN54-210ENST00000510877 CIARTQ8N365 385 aaPredicted RBP10.33□□□□□ -0.76
LIN54-210ENST00000510877 FBXL17Q9UF56 701 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 MOB4Q9Y3A3 225 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 TBL2Q9Y4P3 447 aaKnown RBP10.33□□□□□ -0.76
LIN54-210ENST00000510877 NPBWR2P48146 333 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 PLP1P60201 277 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 FAM106AQ4KMX7 169 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 RPL7L1Q6DKI1 246 aaKnown RBP10.33□□□□□ -0.76
LIN54-210ENST00000510877 C22orf34Q6ZV56 151 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 P2RX4Q99571 388 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 LIN7CQ9NUP9 197 aaKnown RBP10.33□□□□□ -0.76
LIN54-210ENST00000510877 RNF24Q9Y225 148 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 IGSF10Q6WRI0 2623 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 ZNF503-AS2A6NEH8 195 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 LINC00614P0C842 121 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 HIST1H1BP16401 226 aaKnown RBP10.33□□□□□ -0.76
LIN54-210ENST00000510877 ZNF816Q0VGE8 651 aaPredicted RBP10.33□□□□□ -0.76
LIN54-210ENST00000510877 OR52L2PQ8NGH6 319 aa10.33□□□□□ -0.76
LIN54-210ENST00000510877 TRGV3P03979 118 aa10.32□□□□□ -0.76
LIN54-210ENST00000510877 FCER1GP30273 86 aa10.32□□□□□ -0.76
LIN54-210ENST00000510877 PPP1R1AQ13522 171 aa10.32□□□□□ -0.76
LIN54-210ENST00000510877 GAMTQ14353 236 aa10.32□□□□□ -0.76
LIN54-210ENST00000510877 EXOGQ9Y2C4 368 aaKnown RBP10.32□□□□□ -0.76
LIN54-210ENST00000510877 SIRT4Q9Y6E7 314 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms