RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TPRX1Q8N7U7 411 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 OR4P4Q8NGL7 312 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 KCNE4Q8WWG9 221 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 STRADBQ9C0K7 418 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 IGHV3-48P01763 117 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 IGFBP2P18065 325 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 CEBPDP49716 269 aaPredicted RBP6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 CENPWQ5EE01 88 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 MRPL52Q86TS9 123 aaKnown RBP6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 ABHD12Q8N2K0 398 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 OR5B3Q8NH48 314 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 OR1L3Q8NH93 324 aa6.07□□□□□ -1.44
LIMCH1-207ENST00000508466 A0A096LPE4 126 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 A0A1W2PPZ6 126 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 H0YJW9 148 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 K7ERJ3 54 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 VENTXO95231 258 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 RBM11P57052 281 aaKnown RBP6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 Q0VG73 95 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 SPACA3Q8IXA5 215 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 UBALD2Q8IYN6 164 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 OR4S2Q8NH73 311 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 PSMG3Q9BT73 122 aaPredicted RBP6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 HEYLQ9NQ87 328 aaPredicted RBP6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 HS3ST3A1Q9Y663 406 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 V9GYV3 84 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 DRD1P21728 446 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 FAM71F2Q6NXP2 309 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 SHISA2Q6UWI4 295 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 Q6ZR03 302 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 MOB3BQ86TA1 216 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 SPEM1Q8N4L4 309 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 OR10G3Q8NGC4 313 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 OR52E5Q8NH55 327 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 FAM216AQ8WUB2 273 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 SFXN3Q9BWM7 321 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 IL23AQ9NPF7 189 aa6.06□□□□□ -1.44
LIMCH1-207ENST00000508466 C2orf70A6NJV1 201 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 H3BTX0 84 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 RHBDL1O75783 438 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 TIAF1O95411 115 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 MYOD1P15172 320 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 COL9A1P20849 921 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 HTR1DP28221 377 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 RPL30P62888 115 aaKnown RBP6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 PDLIM3Q53GG5 364 aaPredicted RBP6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 PCSK4Q6UW60 755 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 AMTNQ6UX39 209 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM251Q8N6I4 163 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 SCCPDHQ8NBX0 429 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 PP6455Q8WZ26 134 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 CHODLQ9H9P2 273 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 TNFRSF19Q9NS68 423 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 EML6Q6ZMW3 1958 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 C17orf112F2Z3M2 114 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 HLA-DRB1P01911 266 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 CELA3AP09093 270 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 GPR183P32249 361 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 FASLGP48023 281 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 GNG4P50150 75 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 C17orf67Q0P5P2 114 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 KIR3DS1Q14943 382 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 SPATA46Q5T0L3 261 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 SLC25A47Q6Q0C1 308 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 GJC3Q8NFK1 279 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 BLNKQ8WV28 456 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 SPSB1Q96BD6 273 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 EAF1Q96JC9 268 aaPredicted RBP6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 PLA2G2FQ9BZM2 168 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 ZNF331Q9NQX6 463 aaPredicted RBP6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 CACNA1GO43497 2377 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 HELTA6NFD8 242 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 FRG2CA6NGY1 282 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 H0Y980 276 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 NTF4P34130 210 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 RAB30Q15771 203 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 MLANAQ16655 118 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 WDR82Q6UXN9 313 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 TCF24Q7RTU0 167 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM45BQ96B21 275 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 ABHD14BQ96IU4 210 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 SIGMAR1Q99720 223 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 METTL7AQ9H8H3 244 aa6.05□□□□□ -1.44
LIMCH1-207ENST00000508466 CACNA1BQ00975 2339 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 K7EQM0 130 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 IGLV2-14P01704 120 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 ZNF32P17041 273 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 SRD5A2P31213 254 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 CCR5P51681 352 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 PRDX4Q13162 271 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 WFDC2Q14508 124 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 PSG5Q15238 335 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 CCDC144NLQ6NUI1 221 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 GTF2H5Q6ZYL4 71 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 MIR17HGQ75NE6 70 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 OR10AG1Q8NH19 301 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM70Q9BUB7 260 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 CRISPLD2Q9H0B8 497 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 IGFLR1Q9H665 355 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 SPCS1Q9Y6A9 102 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms