RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 STPG3Q8N7X2 389 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 MRGPRDQ8TDS7 321 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 CDX2Q99626 313 aaPredicted RBP14.69□□□□□ -0.06
NUP54-205ENST00000507257 TXN2Q99757 166 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 GAL3ST2Q9H3Q3 398 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 SEPSECSQ9HD40 501 aaKnown RBP14.69□□□□□ -0.06
NUP54-205ENST00000507257 FOXJ2Q9P0K8 574 aa14.69□□□□□ -0.06
NUP54-205ENST00000507257 SPEGQ15772 3267 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 SMIM27A0A1W2PRY6 76 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 HELTA6NFD8 242 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 DPRXA6NFQ7 191 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 C15orf65H3BRN8 121 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 KIR2DS2P43631 304 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 CXCL12P48061 93 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 CEBPDP49716 269 aaPredicted RBP14.68□□□□□ -0.06
NUP54-205ENST00000507257 CENPWQ5EE01 88 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 PSG11Q9UQ72 335 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 HCFC1P51610 2035 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 SPINT2O43291 252 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 CELA3AP09093 270 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 FRMD6-AS1P0C7T7 363 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 C3orf79P0CE67 100 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 GABRA2P47869 451 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 ERVK-16P61578 105 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 SPINK14Q6IE38 97 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 Q6ZN92 141 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 ACP7Q6ZNF0 438 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 OR2D3Q8NGH3 330 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 FAM103A1Q9BTL3 118 aaKnown RBP14.68□□□□□ -0.06
NUP54-205ENST00000507257 CDC42EP3Q9UKI2 254 aa14.68□□□□□ -0.06
NUP54-205ENST00000507257 K7EP13 123 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 BMPR1BO00238 502 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 PROP1O75360 226 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 GPR12P47775 334 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 DUSP3P51452 185 aaPredicted RBP14.67□□□□□ -0.06
NUP54-205ENST00000507257 RTL8BQ17RB0 113 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 SPATA31B1PQ5VZV4 182 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 LEMD1Q68G75 181 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 C11orf53Q8IXP5 236 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 PNKDQ8N490 385 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 Q8TCH9 128 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 WIPF2Q8TF74 440 aaPredicted RBP14.67□□□□□ -0.06
NUP54-205ENST00000507257 LOXL2Q9Y4K0 774 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 DOCK10Q96BY6 2186 aa14.67□□□□□ -0.06
NUP54-205ENST00000507257 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.66□□□□□ -0.06
NUP54-205ENST00000507257 NKX6-3A6NJ46 265 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 ITGB1BP1O14713 200 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 FCGR3BO75015 233 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 GRPP07492 148 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 TIGITQ495A1 244 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 OR13A1Q8NGR1 328 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 RCHY1Q96PM5 261 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 TCF19Q9Y242 345 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 PCSK5Q92824 1860 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 SSTR5P35346 364 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 Q6ZR03 302 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 OR4P4Q8NGL7 312 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 TSKUQ8WUA8 353 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 SSMEM1Q8WWF3 244 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 COMMD5Q9GZQ3 224 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 JPT1Q9UK76 154 aa14.66□□□□□ -0.06
NUP54-205ENST00000507257 IGHV2-26A0A0B4J1V2 119 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 TSPOP30536 169 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 LINC00205P59089 165 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 SELENOVP59797 346 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 UBE2V1Q13404 147 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 TMPRSS7Q7RTY8 843 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 FAM90A1Q86YD7 464 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 SLC25A40Q8TBP6 338 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 NEUROG1Q92886 237 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 C19orf24Q9BVV8 132 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 TTTY12Q9BZ98 90 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 SLC35D1Q9NTN3 355 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 PILRBQ9UKJ0 227 aa14.65□□□□□ -0.06
NUP54-205ENST00000507257 C15orf61A6NNL5 157 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 CA2P00918 260 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 CGAP01215 116 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 PMCHP20382 165 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 SRIP30626 198 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 PTTG1IPP53801 180 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 ZXDAP98168 799 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 CR1LQ2VPA4 569 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 PQLC2Q6ZP29 291 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 ABHD12Q8N2K0 398 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 ZNF439Q8NDP4 499 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 BORCS7Q96B45 105 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 CXXC4Q9H2H0 198 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 BET1LQ9NYM9 111 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 TET2Q6N021 2002 aaPredicted RBP14.64□□□□□ -0.07
NUP54-205ENST00000507257 TRIOO75962 3097 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 IZUMO1RA6ND01 250 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 CCL25O15444 150 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 FOXH1O75593 365 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 LINC00869P0C866 280 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 NPY1RP25929 384 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 MAGEA5P43359 124 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 RBX1P62877 108 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 C21orf62-AS1Q17RA5 79 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 ALKBH6Q3KRA9 238 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 SLC24A4Q8NFF2 622 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms