RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 USF1P22415 310 aaPredicted RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 NPY1RP25929 384 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 ERVFRD-1P60508 538 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 HSPE1P61604 102 aaKnown RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 GNB2P62879 340 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 RUNX1Q01196 453 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 AKR1C1Q04828 323 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 BTN1A1Q13410 526 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 ZNF273Q14593 569 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 AARDQ4LEZ3 155 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 TMEM155Q4W5P6 130 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 PDLIM3Q53GG5 364 aaPredicted RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 KHDC3LQ587J8 217 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 C10orf91Q5T1B1 145 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 OR4A47Q6IF82 309 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 DUX4L9Q6RFH8 374 aaPredicted RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 RBMS3Q6XE24 437 aaKnown RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 ETV3LQ6ZN32 361 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 ZNF833PQ6ZTB9 187 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 TGIF2LYQ8IUE0 185 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 TGIF2LXQ8IUE1 241 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 SLC24A4Q8NFF2 622 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 OR4C13Q8NGP0 309 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 OR5B3Q8NH48 314 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 ZNF596Q8TC21 504 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 SFT2D1Q8WV19 159 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 C17orf50Q8WW18 174 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 LEAP2Q969E1 77 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 FLYWCH2Q96CP2 140 aaKnown RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 HARBI1Q96MB7 349 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 QTRT1Q9BXR0 403 aaKnown RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 ACTR3CQ9C0K3 210 aaPredicted RBP5.68□□□□□ -1.5
USP39-219ENST00000496047 SLC35B3Q9H1N7 401 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 SLC39A9Q9NUM3 307 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 BET1LQ9NYM9 111 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 TCF19Q9Y242 345 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 WASHC3Q9Y3C0 194 aa5.68□□□□□ -1.5
USP39-219ENST00000496047 TRAV1-1A0A0B4J248 108 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 A0A1W2PPE3 182 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 FNDC10F2Z333 226 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 J3QR06 171 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 TSPAN4O14817 238 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 SCO1O75880 301 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 IGHV2-70P01814 119 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 HSPB1P04792 205 aaKnown RBP5.67□□□□□ -1.5
USP39-219ENST00000496047 ARG1P05089 322 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 LIPFP07098 398 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 IGHV1-8P0DP01 117 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 LOXP28300 417 aaPredicted RBP5.67□□□□□ -1.5
USP39-219ENST00000496047 CD1BP29016 333 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 ZNF134P52741 427 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 SUB1P53999 127 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP39-219ENST00000496047 ELLP55199 621 aaPredicted RBP5.67□□□□□ -1.5
USP39-219ENST00000496047 RPS16P62249 146 aaKnown RBP5.67□□□□□ -1.5
USP39-219ENST00000496047 ERHP84090 104 aaKnown RBP5.67□□□□□ -1.5
USP39-219ENST00000496047 LY6DQ14210 128 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 RHEBQ15382 184 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 SOHLH1Q5JUK2 328 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 FFAR4Q5NUL3 377 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 TMEM200BQ69YZ2 307 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 TCF23Q7RTU1 214 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 ZCCHC24Q8N2G6 241 aaKnown RBP5.67□□□□□ -1.5
USP39-219ENST00000496047 ZNF383Q8NA42 475 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 NEUROG1Q92886 237 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 OR4C12Q96R67 309 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 P2RX4Q99571 388 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 TMEM204Q9BSN7 226 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 RSG1Q9BU20 258 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 CLEC7AQ9BXN2 247 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 COMMD5Q9GZQ3 224 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 TMEM133Q9H2Q1 129 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 C7orf69Q9H7B7 122 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 MANBALQ9NQG1 85 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 DCAF16Q9NXF7 216 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 PRELID1Q9Y255 219 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 FAM96BQ9Y3D0 163 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 OR51B2Q9Y5P1 312 aa5.67□□□□□ -1.5
USP39-219ENST00000496047 A0A087X0M5 115 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 PPIAL4CA0A0B4J2A2 164 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 A0A1B0GV50 99 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 A0A1B0GX30 115 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 A0A1W2PPV4 95 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 MAP1LC3B2A6NCE7 125 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 M0R036 132 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 UPK2O00526 184 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 NDUFS6O75380 124 aaKnown RBP5.66□□□□□ -1.5
USP39-219ENST00000496047 ACTL6BO94805 426 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 KBTBD11O94819 623 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 PLAUP00749 431 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 PPIAL4GP0DN37 164 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 CCL3L1P16619 93 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 CEACAM3P40198 252 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 LGALS7P47929 136 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 CDC34P49427 236 aaPredicted RBP5.66□□□□□ -1.5
USP39-219ENST00000496047 PSMB3P49720 205 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 ZNF137PP52743 207 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 PRCDQ00LT1 54 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 VWC2Q2TAL6 325 aa5.66□□□□□ -1.5
USP39-219ENST00000496047 TMEM177Q53S58 311 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms