RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 LEUTXA8MZ59 168 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 BUB1B-PAK6H3BSN5 160 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 UPK2O00526 184 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 FCN3O75636 299 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 TSPAN9O75954 239 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 KBTBD11O94819 623 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 IFNA10P01566 189 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 PRH1P02810 166 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 OR9G9P0C7N8 305 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 PRTN3P24158 256 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-214ENST00000495485 F2RL1P55085 397 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 RELBQ01201 579 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 CLINT1Q14677 625 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 AKR1C8PQ5T2L2 129 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 OR4A47Q6IF82 309 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 TMEM14EPQ6UXP3 125 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 IL34Q6ZMJ4 242 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 EIF4E3Q8N5X7 224 aaKnown RBP8.34□□□□□ -1.07
HDAC3-214ENST00000495485 TEX29Q8N6K0 151 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 TMEM217Q8N7C4 229 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 ST6GALNAC6Q969X2 333 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 MARC2Q969Z3 335 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 C1orf159Q96HA4 380 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 NABP2Q9BQ15 211 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 QTRT1Q9BXR0 403 aaKnown RBP8.34□□□□□ -1.07
HDAC3-214ENST00000495485 MRPL20Q9BYC9 149 aaKnown RBP8.34□□□□□ -1.07
HDAC3-214ENST00000495485 BPESC1Q9GZL8 116 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 PARP11Q9NR21 331 aa8.34□□□□□ -1.07
HDAC3-214ENST00000495485 A0A096LNT2 108 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 A0A1W2PN81 502 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 OOSP1A8MZH6 123 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 C17orf112F2Z3M2 114 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 H0YJW9 148 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 LY6HO94772 140 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 TMEM50AO95807 157 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 IGLV1-47P01700 117 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 IGHV2-5P01817 119 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 METTL15P1P0C7V9 234 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 GATA3P23771 443 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 HTR1DP28221 377 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 CHRNA7P36544 502 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 CAMLGP49069 296 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 LGALS4P56470 323 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 SERF2P84101 59 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 SLC38A11Q08AI6 406 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 TMEM267Q0VDI3 215 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-214ENST00000495485 FAM74A1Q5RGS3 127 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 CCDC144NLQ6NUI1 221 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 CLEC9AQ6UXN8 241 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 C11orf42Q8N5U0 333 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 ZNF709Q8N972 641 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 HSD17B11Q8NBQ5 300 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 LFNGQ8NES3 379 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 OR11H6Q8NGC7 330 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 OR2G3Q8NGZ4 309 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 PSMG3Q9BT73 122 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-214ENST00000495485 TMEM147Q9BVK8 224 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 GGACTQ9BVM4 153 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 COMMD5Q9GZQ3 224 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 MS4A7Q9GZW8 240 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-214ENST00000495485 PLEKHA3Q9HB20 300 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 TMEM14BQ9NUH8 114 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 FBXO7Q9Y3I1 522 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 OR51B2Q9Y5P1 312 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
HDAC3-214ENST00000495485 A8MXK9 166 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 B4DSR2 109 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 H3BP45 60 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 I3L521 148 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 MPDU1O75352 247 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 MBP02144 154 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 ARG1P05089 322 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 FAM157CP0CG43 387 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 MAS1LP35410 378 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 SUB1P53999 127 aaKnown RBP eCLIP8.32□□□□□ -1.08
HDAC3-214ENST00000495485 LINC00205P59089 165 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 OR2B8PP59922 312 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 ARF6P62330 175 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 ERHP84090 104 aaKnown RBP8.32□□□□□ -1.08
HDAC3-214ENST00000495485 AANATQ16613 207 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 TMEM249Q2WGJ8 235 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 MINOS1Q5TGZ0 78 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 OR8G2PQ6IF36 304 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 MOB3BQ86TA1 216 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 PNKDQ8N490 385 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 TEX45Q8NA69 505 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 OR1L8Q8NGR8 309 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 NARFLQ9H6Q4 476 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 UNKLQ9H9P5 680 aaKnown RBP8.32□□□□□ -1.08
HDAC3-214ENST00000495485 WFDC1Q9HC57 220 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 MMP26Q9NRE1 261 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 UQCC1Q9NVA1 299 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 TMEM160Q9NX00 188 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 DPM3Q9P2X0 92 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 TCF19Q9Y242 345 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
HDAC3-214ENST00000495485 MINOS1-NBL1R4GNA1 71 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms