RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 PTTG2Q9NZH5 202 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 LSM2Q9Y333 95 aaKnown RBP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 RBMX2Q9Y388 322 aaKnown RBP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 OR2W1Q9Y3N9 320 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 TMEM272A0A1B0GTI8 110 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 METTL21EPA6NDL7 271 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 CCDC160A6NGH7 325 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 OR4C46A6NHA9 309 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 ZNF701M0R085 212 aaPredicted RBP8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 NOL3O60936 208 aaKnown RBP8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 DEDDO75618 318 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 IGHV3-23P01764 117 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 HLA-DQB1P01920 261 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 FGF2P09038 288 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 GNB3P16520 340 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 RAB6AP20340 208 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 CRHBPP24387 322 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 CLDN12P56749 244 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 RPL8P62917 257 aaKnown RBP8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 IRF3Q14653 427 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 CNPY1Q3B7I2 92 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 PLET1Q6UQ28 207 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 UNQ9165/PRO28630Q6UXU0 137 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 ZNF66Q6ZN08 573 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 TMEM91Q6ZNR0 172 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 TMEM203Q969S6 136 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 ZNF436Q9C0F3 470 aaPredicted RBP8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 RBM38Q9H0Z9 239 aaKnown RBP8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 ACOT13Q9NPJ3 140 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 DAZ1Q9NQZ3 744 aaKnown RBP8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 TPRKBQ9Y3C4 175 aa8.15□□□□□ -1.1
SNRNP200-207ENST00000493271 KIAA1109Q2LD37 5005 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 RAB27BO00194 218 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 PDCD5O14737 125 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 IFNA4P05014 189 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 AREGP15514 252 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 PTBP1P26599 531 aaKnown RBP eCLIP8.14□□□□□ -1.114e-7■■■■■ 29.2
SNRNP200-207ENST00000493271 CALRP27797 417 aaKnown RBP8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 MSMO1Q15800 293 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 THOC7Q6I9Y2 204 aaKnown RBP8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 SPSB3Q6PJ21 355 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 ZNF502Q8TBZ5 544 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 VN1R17PQ8TDU5 208 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 TCTEX1D2Q8WW35 142 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 MAFIPQ8WZ33 124 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 TMEM190Q8WZ59 177 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 DCSTAMPQ9H295 470 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 C11orf68Q9H3H3 251 aaKnown RBP8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 MAP6D1Q9H9H5 199 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 BET1LQ9NYM9 111 aa8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 RSL24D1Q9UHA3 163 aaKnown RBP8.14□□□□□ -1.11
SNRNP200-207ENST00000493271 MFSD2BA6NFX1 497 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 E7EUB6 86 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 PTGES3LE9PB15 166 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 TGOLN2O43493 480 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 HLA-GP17693 338 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 GPR183P32249 361 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 ADMP35318 185 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 RPL30P62888 115 aaKnown RBP8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 MLLT11Q13015 90 aaPredicted RBP8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 RBMS2Q15434 407 aaKnown RBP8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 OR2B11Q5JQS5 317 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 CNIH2Q6PI25 160 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 HSD17B13Q7Z5P4 300 aaPredicted RBP8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 VKORC1L1Q8N0U8 176 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 S4R3C0 116 aa8.13□□□□□ -1.11
SNRNP200-207ENST00000493271 A0A075B6Q4 140 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 A0A1B0GW64 132 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 K7EMT4 169 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 NDUFA4O00483 81 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 RBFOX2O43251 390 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 SCGNO76038 276 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 IGLV2-14P01704 120 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 HES5Q5TA89 166 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 C19orf35Q6ZS72 473 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 LINC00336Q6ZUF6 198 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 MFSD4AQ8N468 514 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 C11orf45Q8TAV5 145 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 C2CD4CQ8TF44 421 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 BSCL2Q96G97 398 aaPredicted RBP8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 RARRES2Q99969 163 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 CSTL1Q9H114 145 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 UBQLN2Q9UHD9 624 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 SELENOKQ9Y6D0 94 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 RYR1P21817 5038 aa8.12□□□□□ -1.11
SNRNP200-207ENST00000493271 VPS13DQ5THJ4 4388 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 IGKV1D-8A0A087WSZ0 117 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 TRAV1-2A0A0B4J238 106 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 IFITM5A6NNB3 132 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 MPTX1A8MV57 137 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 C11orf94C9JXX5 98 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 RGS10O43665 173 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 HSMCR30P0CW71 290 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 NFYAP23511 347 aaPredicted RBP8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 TAS2R31P59538 309 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 RPS25P62851 125 aaKnown RBP8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 FABP5Q01469 135 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 EIF4EBP1Q13541 118 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms