RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SCO2A0A1W2PP80 73 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 BMPR1BO00238 502 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 KLF7O75840 302 aaPredicted RBP9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 IGKV1-39P01597 117 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 IGKV1D-39P04432 117 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 TFF3Q07654 80 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 C12orf54Q6X4T0 127 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 ZNF439Q8NDP4 499 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 OR10D3Q8NH80 312 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 RDH5Q92781 318 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 WNT16Q9UBV4 365 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 MRPS17Q9Y2R5 130 aaKnown RBP9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 NCKAP5O14513 1909 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 TRBV9A0A0B4J1U6 114 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 SS18L1O75177 396 aaPredicted RBP9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 COX5AP20674 150 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 MC5RP33032 325 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 CRYBA4P53673 196 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 RPEL1Q2QD12 228 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 C20orf204Q6ZNR8 217 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 TMEM136Q6ZRR5 245 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 KIR3DL3Q8N743 410 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 STRADBQ9C0K7 418 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 THYN1Q9P016 225 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 OR51B2Q9Y5P1 312 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 A0A0G2JMM0 328 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 A0A1W2PPB8 328 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 hDV102S1A0JD36 115 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 C7orf71A4D174 169 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 KIR3DP1A8MWS1 328 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 HSPB6O14558 160 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 TBR1Q16650 682 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 NEGR1Q7Z3B1 354 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 OR5A2Q8NGI9 324 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 SLC25A40Q8TBP6 338 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 KCNIP2Q9NS61 270 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 A0A087X0K7 114 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 CD300LBA8K4G0 201 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 IGKV1-5P01602 117 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 GDF1P27539 372 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 RPS16P62249 146 aaKnown RBP9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 UBE2G1P62253 170 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 TRIP6Q15654 476 aaKnown RBP9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 TNXAQ16473 311 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 OR8B3Q8NGG8 313 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 OR1L1Q8NH94 360 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 GUCD1Q96NT3 240 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 OR8B2Q96RD0 313 aa9.65□□□□□ -0.86
SEC61A1-205ENST00000483956 SDK2Q58EX2 2172 aa9.65□□□□□ -0.87
SEC61A1-205ENST00000483956 IGLV2-14P01704 120 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 GABRA6Q16445 453 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 GCSAMLQ5JQS6 135 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 MRPL21Q7Z2W9 205 aaKnown RBP9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 NINJ1Q92982 152 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 ZNF48Q96MX3 618 aaPredicted RBP9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 PRO3102Q9H379 93 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 ARL2-SNX15V9GYD0 113 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 TRAV24A0A0B4J272 114 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 FAM90A26D6RGX4 464 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 P04436 131 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 SCGB1A1P11684 91 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 PPOXP50336 477 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 TMEM95Q3KNT9 176 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 SLC25A34Q6PIV7 304 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 NAA38Q9BRA0 125 aaKnown RBP9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 LINC00470Q9BZP3 86 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 HES4Q9HCC6 221 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 LIN7CQ9NUP9 197 aaKnown RBP9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 PSG11Q9UQ72 335 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 TRAV38-1A0A0B4J264 116 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 SERTM2A0A1B0GWG4 89 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 M0R2Z0 102 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 SYNGR1O43759 233 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 LINC00869P0C866 280 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 TCL1AP56279 114 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 DCAF12Q5T6F0 453 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 WDR82Q6UXN9 313 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 SPEM1Q8N4L4 309 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 OR4A5Q8NH83 315 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 JMJD8Q96S16 334 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 PHF7Q9BWX1 381 aaPredicted RBP9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 PRDM6Q9NQX0 595 aa9.64□□□□□ -0.87
SEC61A1-205ENST00000483956 IGKV3D-15A0A087WSY6 115 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 C2orf70A6NJV1 201 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 HSBP1O75506 76 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 CLDN1O95832 211 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 MT-ND6P03923 174 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 GTF2H5Q6ZYL4 71 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 MOB1BQ7L9L4 216 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 SCCPDHQ8NBX0 429 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 SAP25Q8TEE9 199 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 CT55Q8WUE5 264 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 ST20Q9HBF5 79 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 PPP1R3CQ9UQK1 317 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 OR4C46A6NHA9 309 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 CDIPTO14735 213 aa9.63□□□□□ -0.87
SEC61A1-205ENST00000483956 MRPL54Q6P161 138 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms