RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 AMTNQ6UX39 209 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 H1FOOQ8IZA3 346 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 EXOC3-AS1Q8N2X6 119 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 MMGT1Q8N4V1 131 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 OR52R1Q8NGF1 315 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 SGMS2Q8NHU3 365 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST1H2BHQ93079 126 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST1H2BNQ99877 126 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST1H2BMQ99879 126 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 EFCAB1Q9HAE3 211 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 ZNF286AQ9HBT8 521 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 XAGE1AQ9HD64 81 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 HIGD1AQ9Y241 93 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 OVOS2A0A0G2JMS6 1433 aa3.61□□□□□ -1.83
R3HDM1-216ENST00000483065 TAF1LQ8IZX4 1826 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 CAMSAP2Q08AD1 1489 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 PCSK5Q92824 1860 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 IGKV1-6A0A0C4DH72 117 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 TMEM223A0PJW6 202 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 TLCD2A6NGC4 264 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 ZNF432O94892 652 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 METTL15P1P0C7V9 234 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 ZNF32P17041 273 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 SRIP30626 198 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 S100A11P31949 105 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 RBMXP38159 391 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 AQP4P55087 323 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 TAS2R30P59541 319 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 TAS2R20P59543 309 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 HIST1H4AP62805 103 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 CCL20P78556 96 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 MRPS21P82921 87 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 AKR1C1Q04828 323 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 HAGHLQ6PII5 290 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 TRAPPC6BQ86SZ2 158 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 PDZD9Q8IXQ8 264 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 OR4A5Q8NH83 315 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 AP1S3Q96PC3 154 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 YPEL2Q96QA6 119 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 SLC25A21Q9BQT8 299 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 SHANK2-AS3Q9BTD1 123 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 YIPF3Q9GZM5 350 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 C21orf62Q9NYP8 219 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 PCTPQ9UKL6 214 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 CNTLNQ9NXG0 1405 aa3.6□□□□□ -1.83
R3HDM1-216ENST00000483065 BICRAQ9NZM4 1560 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 SETD1AO15047 1707 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 A0A087WUU8 490 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 IGHV1-3A0A0C4DH29 117 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 A0A1B0GVX0 72 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 TRDV1A0A1B0GX56 115 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 IZUMO1RA6ND01 250 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 IFITM10A6NMD0 228 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 C19orf84I3L1E1 186 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 PLA2G10O15496 165 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 NDUFB2O95178 105 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 HLA-DQB1P01920 261 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 PRM2P04554 102 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 LINC00869P0C866 280 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 CSN1S1P47710 185 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 RRN3P1Q2M238 152 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 ZNF695Q8IW36 515 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 AMN1Q8IY45 258 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 Q8N976 141 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 OR4K13Q8NH42 304 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 OR5W2Q8NH69 310 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 PPTC7Q8NI37 304 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 TMEM106AQ96A25 262 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 BORCS8Q96FH0 119 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 ERMAPQ96PL5 475 aaPredicted RBP3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 SMIM3Q9BZL3 60 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 OR8D2Q9GZM6 311 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 NAT8BQ9UHF3 227 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 ERG28Q9UKR5 140 aa3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 KLK5Q9Y337 293 aaPredicted RBP3.59□□□□□ -1.83
R3HDM1-216ENST00000483065 TRIP12Q14669 1992 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 IGKV2D-30A0A075B6S6 120 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 MEIKINA0A087WXM9 373 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 IGHV3-64DA0A0J9YX35 117 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 A6NDX4 124 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 ARRDC5A6NEK1 342 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 C1QAP02745 245 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 IFNA4P05014 189 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 RPL27AP46776 148 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 CXCL12P48061 93 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 MSMO1Q15800 293 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 C15orf32Q32M92 178 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 ZC2HC1BQ5TFG8 222 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 UNQ9165/PRO28630Q6UXU0 137 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 LCA10Q71F78 164 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 GPHB5Q86YW7 130 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 PRR15Q8IV56 129 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 Q8N7P7 452 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 Q8N9W7 124 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 OR4C16Q8NGL9 310 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 H1FXQ92522 213 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 PPP3R2Q96LZ3 170 aa3.58□□□□□ -1.84
R3HDM1-216ENST00000483065 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms