RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ZNF331Q9NQX6 463 aaPredicted RBP10.61□□□□□ -0.71
VPS52-218ENST00000482399 SLC35D1Q9NTN3 355 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 ELOVL5Q9NYP7 299 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 TIMM9Q9Y5J7 89 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 RANP62826 216 aaKnown RBP10.6□□□□□ -0.71
VPS52-218ENST00000482399 LCN2P80188 198 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 Q56UQ5 140 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 DCAF10Q5QP82 559 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 C1orf194Q5T5A4 169 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 TBL2Q9Y4P3 447 aaKnown RBP10.6□□□□□ -0.71
VPS52-218ENST00000482399 COX5BP10606 129 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 TDGF1P3P51864 188 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 SPATA45Q537H7 98 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 DHRS13Q6UX07 377 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 Q6ZWC4 215 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 LHFPL4Q7Z7J7 247 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 STPG3Q8N7X2 389 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 KCNIP2Q9NS61 270 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 FOXJ2Q9P0K8 574 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 TRBV20OR9-2A0A075B6H5 130 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 C15orf62A8K5M9 175 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 C10orf142B7Z368 130 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 RAB29O14966 203 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 IGFBP2P18065 325 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 NPY1RP25929 384 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 GCHFRP30047 84 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 FOXF2Q12947 444 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 CENPWQ5EE01 88 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 RNASEKQ6P5S7 137 aaKnown RBP10.6□□□□□ -0.71
VPS52-218ENST00000482399 MOB3BQ86TA1 216 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 BEND2Q8NDZ0 799 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 TMEM68Q96MH6 324 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 AGMATQ9BSE5 352 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 TMEM140Q9NV12 185 aa10.6□□□□□ -0.71
VPS52-218ENST00000482399 YTHDF2Q9Y5A9 579 aaKnown RBP10.6□□□□□ -0.71
VPS52-218ENST00000482399 SMPD2O60906 423 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 TRAT1Q6PIZ9 186 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 TEPPQ6URK8 271 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 TREML4Q6UXN2 200 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 Q6ZVH6 145 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 MIR17HGQ75NE6 70 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 SH2D2AQ9NP31 389 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 DMDP11532 3685 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 LOC102724200A0A096LPH7 203 aaPredicted RBP10.59□□□□□ -0.71
VPS52-218ENST00000482399 OR5G3P0C626 314 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 PTTG1IPP53801 180 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 ST6GALNAC6Q969X2 333 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 TMEM45BQ96B21 275 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 TCF19Q9Y242 345 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 ASPMQ8IZT6 3477 aa10.59□□□□□ -0.71
VPS52-218ENST00000482399 IL6RP08887 468 aaPredicted RBP10.58□□□□□ -0.72
VPS52-218ENST00000482399 LCN12Q6JVE5 192 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 WDR83OSQ9Y284 106 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.58□□□□□ -0.72
VPS52-218ENST00000482399 PRDX2P32119 198 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 REG1BP48304 166 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 PPP1R35Q8TAP8 253 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 COQ2Q96H96 371 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 LINC00470Q9BZP3 86 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 NPVFQ9HCQ7 196 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 KLF13Q9Y2Y9 288 aaPredicted RBP10.58□□□□□ -0.72
VPS52-218ENST00000482399 MUC3AQ02505 3323 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 BRS3P32247 399 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 ZNF83P51522 516 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 BLNKQ8WV28 456 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 MGST2Q99735 147 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 PYGO2Q9BRQ0 406 aa10.58□□□□□ -0.72
VPS52-218ENST00000482399 ATG2AQ2TAZ0 1938 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 H3BTX0 84 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 RAB7AP51149 207 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 MFAP2P55001 183 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 TCTAP57738 103 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 TRA2AQ13595 282 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS52-218ENST00000482399 SRSF7Q16629 238 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS52-218ENST00000482399 MLANAQ16655 118 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 ZNF718Q3SXZ3 478 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 GGTLC1Q9BX51 225 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 ARRDC1-AS1Q9H2J1 176 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 DNAJC4Q9NNZ3 241 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 RNF24Q9Y225 148 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 SELENOKQ9Y6D0 94 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 CHRNB4P30926 498 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 GPR6P46095 362 aaPredicted RBP10.57□□□□□ -0.72
VPS52-218ENST00000482399 MOGAT3Q86VF5 341 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 Q8NFD4 153 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 SLC24A4Q8NFF2 622 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 BCL2L2Q92843 193 aaPredicted RBP10.57□□□□□ -0.72
VPS52-218ENST00000482399 C5orf30Q96GV9 206 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 BOD1L1Q8NFC6 3051 aa10.57□□□□□ -0.72
VPS52-218ENST00000482399 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 DLEU1O43261 78 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 TNFSF15O95150 251 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 SP1P08047 785 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 USF1P22415 310 aaPredicted RBP10.56□□□□□ -0.72
VPS52-218ENST00000482399 Q6ZR03 302 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 ZBTB34Q8NCN2 500 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 NEU1Q99519 415 aa10.56□□□□□ -0.72
VPS52-218ENST00000482399 TPPP3Q9BW30 176 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms