RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TRAPPC2LQ9UL33 140 aa17.6■□□□□ 0.41
SH3D21-202ENST00000474766 PPP1R3CQ9UQK1 317 aa17.6■□□□□ 0.41
SH3D21-202ENST00000474766 ZFP30Q9Y2G7 519 aa17.6■□□□□ 0.41
SH3D21-202ENST00000474766 CDC34P49427 236 aaPredicted RBP17.59■□□□□ 0.41
SH3D21-202ENST00000474766 KLF14Q8TD94 323 aaPredicted RBP17.59■□□□□ 0.41
SH3D21-202ENST00000474766 MDFIC2A0A1B0GVS7 189 aa17.59■□□□□ 0.41
SH3D21-202ENST00000474766 IGKV3-15P01624 115 aa17.59■□□□□ 0.41
SH3D21-202ENST00000474766 CIB3Q96Q77 187 aaPredicted RBP17.59■□□□□ 0.41
SH3D21-202ENST00000474766 A0A1B0GUS0 222 aa17.58■□□□□ 0.4
SH3D21-202ENST00000474766 P0C879 139 aa17.58■□□□□ 0.4
SH3D21-202ENST00000474766 MPV17P39210 176 aa17.58■□□□□ 0.4
SH3D21-202ENST00000474766 KIR2DL2P43627 348 aaPredicted RBP17.58■□□□□ 0.4
SH3D21-202ENST00000474766 PRR7Q8TB68 274 aa17.58■□□□□ 0.4
SH3D21-202ENST00000474766 AURKAIP1Q9NWT8 199 aaPredicted RBP17.58■□□□□ 0.4
SH3D21-202ENST00000474766 TP53TG3Q9ULZ0 132 aa17.58■□□□□ 0.4
SH3D21-202ENST00000474766 Q0VG73 95 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 WDR31Q8NA23 367 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 ZBTB34Q8NCN2 500 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 C1orf162Q8NEQ5 155 aaPredicted RBP17.57■□□□□ 0.4
SH3D21-202ENST00000474766 OR5T1Q8NG75 326 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 OR5AU1Q8NGC0 362 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 OR4B1Q8NGF8 309 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 ZNF835Q9Y2P0 537 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 MMP23AO75900 390 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 MAJINQ3KP22 176 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 DTD1Q8TEA8 209 aa17.57■□□□□ 0.4
SH3D21-202ENST00000474766 HAND1O96004 215 aa17.56■□□□□ 0.4
SH3D21-202ENST00000474766 GRPP07492 148 aa17.56■□□□□ 0.4
SH3D21-202ENST00000474766 KITLGP21583 273 aa17.56■□□□□ 0.4
SH3D21-202ENST00000474766 C11orf53Q8IXP5 236 aa17.56■□□□□ 0.4
SH3D21-202ENST00000474766 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.56■□□□□ 0.4
SH3D21-202ENST00000474766 KCNS2Q9ULS6 477 aa17.56■□□□□ 0.4
SH3D21-202ENST00000474766 RBM7Q9Y580 266 aaKnown RBP17.56■□□□□ 0.4
SH3D21-202ENST00000474766 A6NJY4 79 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 LRRC30A6NM36 301 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 NDUFB4O95168 129 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 CRISP2P16562 243 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 ZNF16P17020 682 aaPredicted RBP17.55■□□□□ 0.4
SH3D21-202ENST00000474766 GNG10P50151 68 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 LINC00310P59036 64 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 TFF3Q07654 80 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 DRAM1Q8N682 238 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 CNEP1R1Q8N9A8 125 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 C9orf106Q8NAJ2 232 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 SARAFQ96BY9 339 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 HSPB9Q9BQS6 159 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 MSL2Q9HCI7 577 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 IGHV3-64DA0A0J9YX35 117 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 PSPNO60542 156 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 SRSF1Q07955 248 aaKnown RBP eCLIP17.55■□□□□ 0.4
SH3D21-202ENST00000474766 DMRTA1Q5VZB9 504 aa17.55■□□□□ 0.4
SH3D21-202ENST00000474766 USP9XQ93008 2570 aaPredicted RBP17.54■□□□□ 0.4
SH3D21-202ENST00000474766 RBPJQ06330 500 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 OR5I1Q13606 314 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 TDRG1Q3Y452 100 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 VWA1Q6PCB0 445 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 OR10G8Q8NGN5 311 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 PATZ1Q9HBE1 687 aaKnown RBP17.54■□□□□ 0.4
SH3D21-202ENST00000474766 OBP2BQ9NPH6 170 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 TUBG2Q9NRH3 451 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 PAM16Q9Y3D7 125 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 TRBV9A0A0B4J1U6 114 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 RBFOX2O43251 390 aaKnown RBP eCLIP17.54■□□□□ 0.43e-8■■■■■ 45.8
SH3D21-202ENST00000474766 SERF1AO75920 110 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 TIMP3P35625 211 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 TCF23Q7RTU1 214 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 OR1L1Q8NH94 360 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 UBALD1Q8TB05 177 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 SH3BGRL2Q9UJC5 107 aa17.54■□□□□ 0.4
SH3D21-202ENST00000474766 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.53■□□□□ 0.4
SH3D21-202ENST00000474766 TMEM30CPA0ZSE6 113 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 GRIFINA4D1Z8 144 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 AGFG2O95081 481 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 HOXC12P31275 282 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 ATP5G3P48201 142 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 COMPP49747 757 aaPredicted RBP17.53■□□□□ 0.4
SH3D21-202ENST00000474766 RAB7AP51149 207 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 RNF2Q99496 336 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 IL36BQ9NZH7 164 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 COL12A1Q99715 3063 aa17.53■□□□□ 0.4
SH3D21-202ENST00000474766 SIAH2O43255 324 aa17.52■□□□□ 0.4
SH3D21-202ENST00000474766 WDR1O75083 606 aa17.52■□□□□ 0.4
SH3D21-202ENST00000474766 CEBPDP49716 269 aaPredicted RBP17.52■□□□□ 0.4
SH3D21-202ENST00000474766 SLC35E4Q6ICL7 350 aa17.52■□□□□ 0.4
SH3D21-202ENST00000474766 ZNF114Q8NC26 417 aa17.52■□□□□ 0.4
SH3D21-202ENST00000474766 FAM57AQ8TBR7 257 aa17.52■□□□□ 0.4
SH3D21-202ENST00000474766 CXXC4Q9H2H0 198 aa17.52■□□□□ 0.4
SH3D21-202ENST00000474766 PLSCR4Q9NRQ2 329 aa17.52■□□□□ 0.4
SH3D21-202ENST00000474766 SLC45A2Q9UMX9 530 aa17.52■□□□□ 0.4
SH3D21-202ENST00000474766 DIDO1Q9BTC0 2240 aaKnown RBP17.52■□□□□ 0.4
SH3D21-202ENST00000474766 TRGV8A0A0C4DH27 118 aa17.52■□□□□ 0.39
SH3D21-202ENST00000474766 CRYAAP02489 173 aa17.52■□□□□ 0.39
SH3D21-202ENST00000474766 CA7P43166 264 aa17.52■□□□□ 0.39
SH3D21-202ENST00000474766 DOLPP1Q86YN1 238 aa17.52■□□□□ 0.39
SH3D21-202ENST00000474766 VN1R17PQ8TDU5 208 aa17.52■□□□□ 0.39
SH3D21-202ENST00000474766 SLC35E1Q96K37 410 aa17.52■□□□□ 0.39
SH3D21-202ENST00000474766 MRPL18Q9H0U6 180 aaKnown RBP17.52■□□□□ 0.39
SH3D21-202ENST00000474766 KCNIP1Q9NZI2 227 aa17.52■□□□□ 0.39
SH3D21-202ENST00000474766 CLN8Q9UBY8 286 aa17.52■□□□□ 0.39
SH3D21-202ENST00000474766 YLPM1P49750 1951 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms