RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 VAMP1P23763 118 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 G6PCP35575 357 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 AKR1C2P52895 323 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 GNB1P62873 340 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 SUPT4H1P63272 117 aaKnown RBP9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 CFHR3Q02985 330 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 TMEM187Q14656 261 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 MRGPRG-AS1Q2M3A8 158 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 SSX9Q7RTT3 188 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 ZNF429Q86V71 674 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 OR1L8Q8NGR8 309 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 ENKURQ8TC29 256 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 SRSF12Q8WXF0 261 aaKnown RBP9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 TAF15Q92804 592 aaKnown RBP eCLIP9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 FOXA2Q9Y261 457 aaPredicted RBP9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 CYB5BO43169 146 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 DUS4LO95620 317 aaKnown RBP9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 DHFRP00374 187 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 P0C879 139 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 CD83Q01151 205 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 IFITM3Q01628 133 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 AARDQ4LEZ3 155 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 TMEM268Q5VZI3 342 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 TMEM65Q6PI78 240 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 UNQ5815/PRO19632Q6UWF5 114 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 SELENOHQ8IZQ5 122 aaKnown RBP9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 LFNGQ8NES3 379 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 COQ8AQ8NI60 647 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 RNASE11Q8TAA1 199 aaKnown RBP9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 GRPEL2Q8TAA5 225 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 RBMXL1Q96E39 390 aaKnown RBP9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 NOL4LQ96MY1 436 aaPredicted RBP9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 C20orf85Q9H1P6 137 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 SLA2Q9H6Q3 261 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 TMEM14BQ9NUH8 114 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 COA4Q9NYJ1 87 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 TMED3Q9Y3Q3 217 aa9.92□□□□□ -0.82
SPTLC1-204ENST00000469778 C9orf170A2RU37 121 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 IGKV1-5P01602 117 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 H2AFB2P0C5Z0 115 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 OR4E1P0C645 316 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 TRAPPC2P0DI81 140 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 TRAPPC2BP0DI82 140 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 SLC25A6P12236 298 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 OR2B8PP59922 312 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 HSPE1P61604 102 aaKnown RBP9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 SSBP2P81877 361 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 PPP1R1AQ13522 171 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 C4orf46Q504U0 113 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 CXorf66Q5JRM2 361 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 PLET1Q6UQ28 207 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 LYG2Q86SG7 212 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 NDUFA11Q86Y39 141 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 TTC9CQ8N5M4 171 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 OR52E5Q8NH55 327 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 PHB2Q99623 299 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 QTRT1Q9BXR0 403 aaKnown RBP9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 NUDT15Q9NV35 164 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 OR51B2Q9Y5P1 312 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 TSSC4Q9Y5U2 329 aaPredicted RBP9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 WSB1Q9Y6I7 421 aa9.91□□□□□ -0.82
SPTLC1-204ENST00000469778 TEX50A0A1B0GTY4 177 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 A0A1B0GU03 582 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 C15orf61A6NNL5 157 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 NPIPB5A8MRT5 1133 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 G3V318 75 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 PRAF2O60831 178 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 HLA-AP01891 365 aaKnown RBP9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 IL5P05113 134 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 CRYGCP07315 174 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 OR9G9P0C7N8 305 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 PSMB8P28062 276 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 NDPQ00604 133 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 DCTN2Q13561 401 aaKnown RBP9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 FAM209BQ5JX69 171 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 ZNF329Q86UD4 541 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 OR1L6Q8NGR2 347 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 FAM110DQ8TAY7 271 aaPredicted RBP9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 MITD1Q8WV92 249 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 MARVELD1Q9BSK0 173 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 PDCD10Q9BUL8 212 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 NDUFA4L2Q9NRX3 87 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 FLVCR2Q9UPI3 526 aa9.9□□□□□ -0.82
SPTLC1-204ENST00000469778 TNCP24821 2201 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 TRAV3A0A0B4J244 114 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 A0A0B4J293 547 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 A0A0G2JLM5 398 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 A0A1W2PN81 502 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 TCRBV4S1A1TA0A5B7 111 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 INS-IGF2F8WCM5 200 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 RBMXL2O75526 392 aaKnown RBP9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 PTTG1O95997 202 aa9.89□□□□□ -0.83
SPTLC1-204ENST00000469778 HIST1H1BP16401 226 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms