RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 TSNAXQ99598 290 aaKnown RBP4.72□□□□□ -1.65
USP39-213ENST00000467885 ZNF436Q9C0F3 470 aaPredicted RBP4.72□□□□□ -1.65
USP39-213ENST00000467885 FBXL15Q9H469 300 aa4.72□□□□□ -1.65
USP39-213ENST00000467885 C11orf1Q9H5F2 150 aa4.72□□□□□ -1.65
USP39-213ENST00000467885 RANBP3Q9H6Z4 567 aaPredicted RBP4.72□□□□□ -1.65
USP39-213ENST00000467885 ESM1Q9NQ30 184 aa4.72□□□□□ -1.65
USP39-213ENST00000467885 TMEM14BQ9NUH8 114 aa4.72□□□□□ -1.65
USP39-213ENST00000467885 COA4Q9NYJ1 87 aa4.72□□□□□ -1.65
USP39-213ENST00000467885 GSKIPQ9P0R6 139 aa4.72□□□□□ -1.65
USP39-213ENST00000467885 METTL1Q9UBP6 276 aaKnown RBP4.72□□□□□ -1.65
USP39-213ENST00000467885 CDC42EP3Q9UKI2 254 aa4.72□□□□□ -1.65
USP39-213ENST00000467885 CREBBPQ92793 2442 aa4.72□□□□□ -1.65
USP39-213ENST00000467885 ANK3Q12955 4377 aaKnown RBP4.71□□□□□ -1.66
USP39-213ENST00000467885 PIGBOS1A0A0B4J2F0 54 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 C5orf51A6NDU8 294 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 NCBP2LA6PVI3 153 aaKnown RBP4.71□□□□□ -1.66
USP39-213ENST00000467885 G3V3Q6 166 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 H0YIZ8 118 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 GOSR2O14653 212 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 EREGO14944 169 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 NBR2O15453 112 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 CHST1O43916 411 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 OR2F2O95006 317 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 TMEM50AO95807 157 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 MBPP02686 304 aaPredicted RBP4.71□□□□□ -1.66
USP39-213ENST00000467885 FGF2P09038 288 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 TRAPPC2P0DI81 140 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 TRAPPC2BP0DI82 140 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 TMEM11P17152 192 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 OR2B8PP59922 312 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 CYCSP99999 105 aaKnown RBP4.71□□□□□ -1.66
USP39-213ENST00000467885 CD300CQ08708 224 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 SMCO1Q147U7 214 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 IAH1Q2TAA2 248 aaPredicted RBP4.71□□□□□ -1.66
USP39-213ENST00000467885 TM4SF20Q53R12 229 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 ZNF429Q86V71 674 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 TMEM219Q86XT9 240 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 TMEM86BQ8N661 226 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 C5orf56Q8N8D9 126 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 OR5M8Q8NGP6 311 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 OR52E5Q8NH55 327 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 OR5R1Q8NH85 324 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 SSMEM1Q8WWF3 244 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 HARBI1Q96MB7 349 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 FYTTD1Q96QD9 318 aaKnown RBP4.71□□□□□ -1.66
USP39-213ENST00000467885 CLCC1Q96S66 551 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 QTRT1Q9BXR0 403 aaKnown RBP4.71□□□□□ -1.66
USP39-213ENST00000467885 CHIAQ9BZP6 476 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 ZNF430Q9H8G1 570 aaPredicted RBP4.71□□□□□ -1.66
USP39-213ENST00000467885 NDUFA4L2Q9NRX3 87 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 TMEM140Q9NV12 185 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 C1RLQ9NZP8 487 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 CACNG5Q9UF02 275 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 POMT1Q9Y6A1 747 aa4.71□□□□□ -1.66
USP39-213ENST00000467885 IGHV7-81A0A0B4J1V7 117 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 MSGN1A6NI15 193 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 SH2D7A6NKC9 451 aaPredicted RBP4.7□□□□□ -1.66
USP39-213ENST00000467885 FAM25EA8MYX2 175 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 CLDN34H7C241 214 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 ST8SIA3O43173 380 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 FGF16O43320 207 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 SNAPC5O75971 98 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 SPDEFO95238 335 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 HLA-DRB1P01911 266 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 FAM157CP0CG43 387 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 SRD5A1P18405 259 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 HNF1AP20823 631 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 PSMB6P28072 239 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 MAS1LP35410 378 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 VDAC2P45880 294 aaPredicted RBP4.7□□□□□ -1.66
USP39-213ENST00000467885 SPCS3P61009 180 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 ERVK-16P61578 105 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 POLR2GP62487 172 aaKnown RBP eCLIP4.7□□□□□ -1.66
USP39-213ENST00000467885 RPL8P62917 257 aaKnown RBP4.7□□□□□ -1.66
USP39-213ENST00000467885 CD83Q01151 205 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 TNFRSF9Q07011 255 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 FXYD3Q14802 87 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 MMDQ15546 238 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 VMA21Q3ZAQ7 101 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 FOXRED2Q8IWF2 684 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 MMD2Q8IY49 270 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 OR10W1Q8NGF6 305 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 OR4A16Q8NH70 328 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 VSTM2AQ8TAG5 236 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 DUX5Q96PT3 197 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 SLC25A33Q9BSK2 321 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 NMES1Q9C002 83 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 RANGRFQ9HD47 186 aaPredicted RBP4.7□□□□□ -1.66
USP39-213ENST00000467885 TNFRSF19Q9NS68 423 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 FKBP11Q9NYL4 201 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 HSPB7Q9UBY9 170 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 PITPNC1Q9UKF7 332 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 PRNDQ9UKY0 176 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 FOXA2Q9Y261 457 aaPredicted RBP4.7□□□□□ -1.66
USP39-213ENST00000467885 ZNF257Q9Y2Q1 563 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 OR51B2Q9Y5P1 312 aa4.7□□□□□ -1.66
USP39-213ENST00000467885 TRAV14DV4A0A0A6YYC5 116 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 C15orf61A6NNL5 157 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 TEX22C9J3V5 150 aa4.69□□□□□ -1.66
USP39-213ENST00000467885 FAM90A26D6RGX4 464 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms