RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 RNF152Q8N8N0 203 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 RRNAD1Q96FB5 475 aaKnown RBP15.51■□□□□ 0.07
COL9A3-204ENST00000463487 TMEM222Q9H0R3 208 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 SLA2Q9H6Q3 261 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 PRNDQ9UKY0 176 aa15.51■□□□□ 0.07
COL9A3-204ENST00000463487 A0A1W2PRX2 142 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 IGLV1-40P01703 118 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 RPL23AP62750 156 aaKnown RBP15.5■□□□□ 0.07
COL9A3-204ENST00000463487 SRPXP78539 464 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 SSBP2P81877 361 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-204ENST00000463487 SP6Q3SY56 376 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 TMEM128Q5BJH2 165 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 ZNF695Q8IW36 515 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 CENPSQ8N2Z9 138 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 OR4A16Q8NH70 328 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 GALNT14Q96FL9 552 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 SEC22AQ96IW7 307 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 FYTTD1Q96QD9 318 aaKnown RBP15.5■□□□□ 0.07
COL9A3-204ENST00000463487 ZNF355PQ9NSJ1 428 aa15.5■□□□□ 0.07
COL9A3-204ENST00000463487 LYRM1O43325 122 aa15.49■□□□□ 0.07
COL9A3-204ENST00000463487 RBMXL2O75526 392 aaKnown RBP15.49■□□□□ 0.07
COL9A3-204ENST00000463487 NDUFB6O95139 128 aa15.49■□□□□ 0.07
COL9A3-204ENST00000463487 CCR6P51684 374 aa15.49■□□□□ 0.07
COL9A3-204ENST00000463487 MZT2BQ6NZ67 158 aa15.49■□□□□ 0.07
COL9A3-204ENST00000463487 MRPL41Q8IXM3 137 aaKnown RBP15.49■□□□□ 0.07
COL9A3-204ENST00000463487 ADAD2Q8NCV1 583 aaKnown RBP15.49■□□□□ 0.07
COL9A3-204ENST00000463487 RBPMSQ93062 196 aaKnown RBP15.49■□□□□ 0.07
COL9A3-204ENST00000463487 SRSF8Q9BRL6 282 aaKnown RBP15.49■□□□□ 0.07
COL9A3-204ENST00000463487 CDS2O95674 445 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 DHFRP00374 187 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 RPLP1P05386 114 aaKnown RBP15.48■□□□□ 0.07
COL9A3-204ENST00000463487 IL6RP08887 468 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-204ENST00000463487 OR9G9P0C7N8 305 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 RAB9AP51151 201 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 UBE2MP61081 183 aaKnown RBP15.48■□□□□ 0.07
COL9A3-204ENST00000463487 PRR31Q5SQ13 230 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 C10orf55Q5SWW7 151 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 HSD17B13Q7Z5P4 300 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-204ENST00000463487 FAM219AQ8IW50 185 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 OR1L8Q8NGR8 309 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 OR5B3Q8NH48 314 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 FAM110DQ8TAY7 271 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-204ENST00000463487 IL22RA2Q969J5 263 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 QTRT1Q9BXR0 403 aaKnown RBP15.48■□□□□ 0.07
COL9A3-204ENST00000463487 COA4Q9NYJ1 87 aa15.48■□□□□ 0.07
COL9A3-204ENST00000463487 ANK2Q01484 3957 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 UPK1BO75841 260 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 IGKV1-39P01597 117 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 IGKV1D-39P04432 117 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 VAMP1P23763 118 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 CDX1P47902 265 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-204ENST00000463487 KLHL30-AS1Q8NEE0 82 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 OR5T1Q8NG75 326 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 GLYATL2Q8WU03 294 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 TMEM230Q96A57 120 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 UBE2E2Q96LR5 201 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 OR51B2Q9Y5P1 312 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 TNCP24821 2201 aa15.47■□□□□ 0.07
COL9A3-204ENST00000463487 TRAV3A0A0B4J244 114 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 C15orf61A6NNL5 157 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 CYB5BO43169 146 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 TRAPPC2P0DI81 140 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 TRAPPC2BP0DI82 140 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 APELAP0DMC3 54 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 RAB25P57735 213 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 TPPP2P59282 170 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 TMEM268Q5VZI3 342 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 LGI3Q8N145 548 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 TMEM56Q96MV1 263 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 PDCD10Q9BUL8 212 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 ZNF257Q9Y2Q1 563 aa15.46■□□□□ 0.07
COL9A3-204ENST00000463487 A0A0G2JLM5 398 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 PLA2G10O15496 165 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 SOX15O60248 233 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 BRI3O95415 125 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 PF4P02776 101 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 TRGV3P03979 118 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 OR2B8PP59922 312 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 ASPHD1Q5U4P2 390 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 HIST2H2BDQ6DRA6 164 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 TTC9CQ8N5M4 171 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 C4orf3Q8WVX3 66 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 TMEM14BQ9NUH8 114 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 CACFD1Q9UGQ2 172 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 NSG2Q9Y328 171 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 TMEM56-RWDD3S4R434 201 aa15.45■□□□□ 0.06
COL9A3-204ENST00000463487 NPIPB5A8MRT5 1133 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 ADARB2-AS1A8MUL3 147 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 TEX22C9J3V5 150 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 TSPAN15O95858 294 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 IGKV1-5P01602 117 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 BTCP35070 178 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 DEFA1P59665 94 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 DEFA3P59666 94 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 TMEM187Q14656 261 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 LCNL1Q6ZST4 164 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 SELENOHQ8IZQ5 122 aaKnown RBP15.44■□□□□ 0.06
COL9A3-204ENST00000463487 ZNF491Q8N8L2 437 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 MYOZ3Q8TDC0 251 aa15.44■□□□□ 0.06
COL9A3-204ENST00000463487 LSM10Q969L4 123 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms