RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 OPN1MW2P0DN77 364 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 OPN1MW3P0DN78 364 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 HKR1P10072 659 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 MYOD1P15172 320 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 HLA-GP17693 338 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 MAS1LP35410 378 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 RPL27AP46776 148 aaKnown RBP8.04□□□□□ -1.12
UPF2-204ENST00000460569 COMPP49747 757 aaPredicted RBP8.04□□□□□ -1.12
UPF2-204ENST00000460569 SSBP2P81877 361 aaPredicted RBP8.04□□□□□ -1.12
UPF2-204ENST00000460569 FXYD3Q14802 87 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 NMSQ5H8A3 153 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 GGNBP1Q5YKI7 109 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 THOC7Q6I9Y2 204 aaKnown RBP8.04□□□□□ -1.12
UPF2-204ENST00000460569 ZNF562Q6V9R5 426 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 FOXRED2Q8IWF2 684 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 CADM3Q8N126 398 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 Q8N2B8 174 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 OR4F5Q8NH21 305 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 SRSF12Q8WXF0 261 aaKnown RBP8.04□□□□□ -1.12
UPF2-204ENST00000460569 FAM103A1Q9BTL3 118 aaKnown RBP8.04□□□□□ -1.12
UPF2-204ENST00000460569 COMMD5Q9GZQ3 224 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 CACNG5Q9UF02 275 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 FBXO7Q9Y3I1 522 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 TMED3Q9Y3Q3 217 aa8.04□□□□□ -1.12
UPF2-204ENST00000460569 C7orf66A4D0T2 115 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 LINC01548A6NM66 108 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 DBX1A6NMT0 343 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 AP4M1O00189 453 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 SSNA1O43805 119 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 FGF2P09038 288 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 SMCO1Q147U7 214 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 ECSCRQ19T08 205 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 KRTAP24-1Q3LI83 254 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 Q6ZRM9 215 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 OR1S1Q8NH92 325 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 NOL4LQ96MY1 436 aaPredicted RBP8.03□□□□□ -1.12
UPF2-204ENST00000460569 FYTTD1Q96QD9 318 aaKnown RBP8.03□□□□□ -1.12
UPF2-204ENST00000460569 SPIN2AQ99865 258 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 SPIN2BQ9BPZ2 258 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 PDCD10Q9BUL8 212 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 HINT2Q9BX68 163 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 QTRT1Q9BXR0 403 aaKnown RBP8.03□□□□□ -1.12
UPF2-204ENST00000460569 C16orf95Q9H693 158 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 TMEM14BQ9NUH8 114 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 FKBP11Q9NYL4 201 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 LINC00527Q9UJ94 153 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 FOXA2Q9Y261 457 aaPredicted RBP8.03□□□□□ -1.12
UPF2-204ENST00000460569 OR51B2Q9Y5P1 312 aa8.03□□□□□ -1.12
UPF2-204ENST00000460569 FAM25EA8MYX2 175 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 ST8SIA3O43173 380 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 NXPH3O95157 252 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 APELAP0DMC3 54 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 MDKP21741 143 aaPredicted RBP8.02□□□□□ -1.13
UPF2-204ENST00000460569 ZNF429Q86V71 674 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 STPG2Q8N412 459 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 OR1L8Q8NGR8 309 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 SGMS2Q8NHU3 365 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 LINC01006Q8NI28 216 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.02□□□□□ -1.13
UPF2-204ENST00000460569 SERTAD4Q9NUC0 356 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 WSB1Q9Y6I7 421 aa8.02□□□□□ -1.13
UPF2-204ENST00000460569 TRAV41A0A0B4J266 112 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 TEX50A0A1B0GTY4 177 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 A0A1B0GU03 582 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 C13orf42A0A1B0GVH6 325 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 C5orf51A6NDU8 294 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 HMX3A6NHT5 357 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 MSGN1A6NI15 193 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 MPTX1A8MV57 137 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 E7EUB6 86 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 G3V318 75 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 GOSR2O14653 212 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 IFNA17P01571 189 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 IGF1P05019 195 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 TRAPPC2P0DI81 140 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 TRAPPC2BP0DI82 140 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 EGR2P11161 476 aaPredicted RBP8.01□□□□□ -1.13
UPF2-204ENST00000460569 SLC25A6P12236 298 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 RIPPLY3P57055 190 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 C2orf68Q2NKX9 166 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 IAH1Q2TAA2 248 aaPredicted RBP8.01□□□□□ -1.13
UPF2-204ENST00000460569 SPINK9Q5DT21 86 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 UNQ5815/PRO19632Q6UWF5 114 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 LFNGQ8NES3 379 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 OR5B3Q8NH48 314 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 C19orf24Q9BVV8 132 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 COA4Q9NYJ1 87 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 ZNF580Q9UK33 172 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 ZNF257Q9Y2Q1 563 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 ATRQ13535 2644 aa8.01□□□□□ -1.13
UPF2-204ENST00000460569 A0A1B0GW64 132 aa8□□□□□ -1.13
UPF2-204ENST00000460569 A0A1W2PN81 502 aa8□□□□□ -1.13
UPF2-204ENST00000460569 CLPSL1A2RUU4 121 aa8□□□□□ -1.13
UPF2-204ENST00000460569 CGB1A6NKQ9 187 aa8□□□□□ -1.13
UPF2-204ENST00000460569 TEX22C9J3V5 150 aa8□□□□□ -1.13
UPF2-204ENST00000460569 HAX1O00165 279 aa8□□□□□ -1.13
UPF2-204ENST00000460569 CHRNA7P36544 502 aa8□□□□□ -1.13
UPF2-204ENST00000460569 HOXA1P49639 335 aaPredicted RBP8□□□□□ -1.13
UPF2-204ENST00000460569 CRIP2P52943 208 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms