RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 GNB1P62873 340 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 NDPQ00604 133 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 DHRS2Q13268 280 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 TNXAQ16473 311 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 C4orf46Q504U0 113 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 PLET1Q6UQ28 207 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 HSD17B13Q7Z5P4 300 aaPredicted RBP11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 LYG2Q86SG7 212 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 ZNF429Q86V71 674 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 MINDY2Q8NBR6 621 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 ABHD5Q8WTS1 349 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 COMMD5Q9GZQ3 224 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
HMGXB4-204ENST00000455359 TRAV6A0A075B6T7 132 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 C15orf61A6NNL5 157 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 BRI3O95415 125 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 DUS4LO95620 317 aaKnown RBP11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 IL5P05113 134 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 ELANEP08246 267 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 RPL27AP46776 148 aaKnown RBP11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 CFHR3Q02985 330 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 C19orf54Q5BKX5 351 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 TEX38Q6PEX7 206 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 C3orf56Q8N813 242 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 OR4A16Q8NH70 328 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 SPATA3Q8NHX4 192 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 COQ8AQ8NI60 647 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 RNASE11Q8TAA1 199 aaKnown RBP11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 GRPEL2Q8TAA5 225 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 LHFPL5Q8TAF8 219 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 NOL4LQ96MY1 436 aaPredicted RBP11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 TMEM14BQ9NUH8 114 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 COA4Q9NYJ1 87 aa11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
HMGXB4-204ENST00000455359 TENM1Q9UKZ4 2725 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 MSGN1A6NI15 193 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 H3BUA1 57 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 HAX1O00165 279 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 PRAF2O60831 178 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 IGHG4P01861 327 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 FOXE3Q13461 319 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 ANKRD55Q3KP44 614 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 AARDQ4LEZ3 155 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 SHISA2Q6UWI4 295 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 MRPL41Q8IXM3 137 aaKnown RBP11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 SLC35G3Q8N808 338 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 OR5AU1Q8NGC0 362 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 OR5M8Q8NGP6 311 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 MITD1Q8WV92 249 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 MARVELD1Q9BSK0 173 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 QTRT1Q9BXR0 403 aaKnown RBP11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 TMED3Q9Y3Q3 217 aa11.24□□□□□ -0.61
HMGXB4-204ENST00000455359 TRAV3A0A0B4J244 114 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 INMT-MINDY4F8WBC2 141 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 IGLV1-40P01703 118 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 OR9G9P0C7N8 305 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 TRAPPC2P0DI81 140 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 TRAPPC2BP0DI82 140 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 SLC25A6P12236 298 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 PPIFP30405 207 aaKnown RBP11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 OR2B8PP59922 312 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 NMSQ5H8A3 153 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 UNQ5815/PRO19632Q6UWF5 114 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 RNF152Q8N8N0 203 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 LFNGQ8NES3 379 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 ZNF431Q8TF32 576 aaPredicted RBP11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 CASTOR1Q8WTX7 329 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 PHB2Q99623 299 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 FBXO7Q9Y3I1 522 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 OR51B2Q9Y5P1 312 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 WSB1Q9Y6I7 421 aa11.23□□□□□ -0.61
HMGXB4-204ENST00000455359 TNCP24821 2201 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 A0A0B4J293 547 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 TEX50A0A1B0GTY4 177 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 A0A1B0GU03 582 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 G3V318 75 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 FBXO24O75426 580 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 RBMXL2O75526 392 aaKnown RBP11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 DHFRP00374 187 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 ECSCRQ19T08 205 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 LYZL2Q7Z4W2 148 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 GPR146Q96CH1 333 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 CITED1Q99966 193 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 FAM103A1Q9BTL3 118 aaKnown RBP11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 GPN1Q9HCN4 374 aaPredicted RBP11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 NDUFA4L2Q9NRX3 87 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 LINC00527Q9UJ94 153 aa11.22□□□□□ -0.61
HMGXB4-204ENST00000455359 A0A1W2PN81 502 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 NPIPB5A8MRT5 1133 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 SNRPGP15A8MWD9 76 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 TEX22C9J3V5 150 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 IFNA21P01568 189 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms