RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 SHROOM2Q13796 1616 aa3.15□□□□□ -1.91
TM9SF3-202ENST00000443638 MADDQ8WXG6 1647 aa3.15□□□□□ -1.91
TM9SF3-202ENST00000443638 STRCQ7RTU9 1775 aa3.15□□□□□ -1.91
TM9SF3-202ENST00000443638 CHD5Q8TDI0 1954 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 NUP160Q12769 1436 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 SSH2Q76I76 1423 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 YEATS2Q9ULM3 1422 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 hCG_1818297A0A087WSY0 165 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 C7orf66A4D0T2 115 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 TMEM150BA6NC51 233 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 ZNF98A6NK75 572 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 A8MT66 165 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 SRP19P09132 144 aaKnown RBP3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 CRABP1P29762 137 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 ERP29P30040 261 aaKnown RBP3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 TAF6P49848 677 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 FOXA1P55317 472 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 GNG5P63218 68 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 FLI1Q01543 452 aaPredicted RBP3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 CCDC58Q4VC31 144 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 MUC7Q8TAX7 377 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 GPR119Q8TDV5 335 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 RMND5BQ96G75 393 aaPredicted RBP3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 IGF2BP2-AS1Q96M15 143 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 CGREF1Q99674 301 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 AIF1LQ9BQI0 150 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 C11orf68Q9H3H3 251 aaKnown RBP3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 LYRM2Q9NU23 88 aaPredicted RBP3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 ADAMTS9Q9P2N4 1935 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 GRIN2AQ12879 1464 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 PLA2R1Q13018 1463 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 NEO1Q92859 1461 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 SRCAPQ6ZRS2 3230 aa3.14□□□□□ -1.91
TM9SF3-202ENST00000443638 ABCC8Q09428 1581 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 IGLV3-16A0A075B6K0 115 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 IGLV3-12A0A075B6K2 115 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 DHRS12A0PJE2 317 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 EFCAB10A6NFE3 127 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 PIRO00625 290 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 CRHP06850 196 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 ZNF286BP0CG31 522 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 SCGB1A1P11684 91 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 CRABP2P29373 138 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 DHRS2Q13268 280 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 AKR1C8PQ5T2L2 129 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 RASL11AQ6T310 242 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 SLC7A6Q92536 515 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 SPIN2AQ99865 258 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 SPIN2BQ9BPZ2 258 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 SEC22CQ9BRL7 303 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 MED29Q9NX70 200 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 TP73-AS1Q9UF72 201 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 CYSLTR1Q9Y271 337 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 SMAD5-AS1Q9Y6J3 95 aa3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 RIMS1Q86UR5 1692 aaKnown RBP3.13□□□□□ -1.91
TM9SF3-202ENST00000443638 IGKV1D-43A0A0B4J1Z2 117 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 TRAV4A0A0B4J268 109 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 IGSF23A1L1A6 192 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 C19orf71A6NCJ1 209 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 PRORSD1PA6NEY8 169 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 HMGB3O15347 200 aaKnown RBP3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 ORC5O43913 435 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 RBP1P09455 135 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 PPIBP23284 216 aaKnown RBP3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 PHBP35232 272 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 NCALDP61601 193 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 SDIM1Q6ZPB5 146 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 OR13D1Q8NGV5 346 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 RPS4Y2Q8TD47 263 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 GLI2P10070 1586 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 NACAE9PAV3 2078 aa3.12□□□□□ -1.91
TM9SF3-202ENST00000443638 MIA2Q96PC5 1412 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 PCM1Q15154 2024 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 EPRSP07814 1512 aaKnown RBP3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 C17orf51A8MQB3 221 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 A8MU10 97 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 A8MWP6 167 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 I3L521 148 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 M0QZK8 103 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 IGKV1-5P01602 117 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 ZNF705DP0CH99 300 aaPredicted RBP3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 GABRA2P47869 451 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 SERPINB10P48595 397 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 RBM11P57052 281 aaKnown RBP3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 HBA1P69905 142 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 CCL20P78556 96 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 SSX8Q7RTT4 187 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 DHFR2Q86XF0 187 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 EXOC3-AS1Q8N2X6 119 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 OR13C4Q8NGS5 318 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 TOMM6Q96B49 74 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 TCEAL4Q96EI5 215 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 CCDC90BQ9GZT6 254 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 SMDT1Q9H4I9 107 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 EFCAB1Q9HAE3 211 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 ACER3Q9NUN7 267 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 SNX12Q9UMY4 172 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 ITGB4P16144 1822 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 MAP3K4Q9Y6R4 1608 aa3.11□□□□□ -1.91
TM9SF3-202ENST00000443638 NID2Q14112 1375 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms