RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PPP5CP53041 499 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 PIGPP57054 158 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 RND3P61587 244 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 SURF2Q15527 256 aaPredicted RBP11.43□□□□□ -0.58
CHD1-202ENST00000414220 MRGPRG-AS1Q2M3A8 158 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 DEFB136Q30KP8 78 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 OXLD1Q5BKU9 147 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 FAM209BQ5JX69 171 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 REC114Q7Z4M0 266 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 HSD17B13Q7Z5P4 300 aaPredicted RBP11.43□□□□□ -0.58
CHD1-202ENST00000414220 TTC9CQ8N5M4 171 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 CASTOR1Q8WTX7 329 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 DUX3Q96PT4 197 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 SOSTQ9BQB4 213 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 RANGRFQ9HD47 186 aaPredicted RBP11.43□□□□□ -0.58
CHD1-202ENST00000414220 ZNF257Q9Y2Q1 563 aa11.43□□□□□ -0.58
CHD1-202ENST00000414220 TRRAPQ9Y4A5 3859 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 ANKRD20A5PA0PJZ0 165 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 FAM223BA6NKX1 122 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 IGHV3-11P01762 117 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 CTSDP07339 412 aaPredicted RBP11.42□□□□□ -0.58
CHD1-202ENST00000414220 ZNF735P0CB33 412 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 DEFA4P12838 97 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 INPP1P49441 399 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 FAM223AQ8IWN6 122 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 Q8N402 240 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 TOMM5Q8N4H5 51 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 OR4D10Q8NGI6 311 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 DEDD2Q8WXF8 326 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 SRSF8Q9BRL6 282 aaKnown RBP11.42□□□□□ -0.58
CHD1-202ENST00000414220 MCUBQ9NWR8 336 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 PRNDQ9UKY0 176 aa11.42□□□□□ -0.58
CHD1-202ENST00000414220 NBEAL1Q6ZS30 2694 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 C3orf85A0A1B0GTC6 90 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 NPIPB5A8MRT5 1133 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 H0Y980 276 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 HIST1H1BP16401 226 aaKnown RBP11.41□□□□□ -0.58
CHD1-202ENST00000414220 G6PCP35575 357 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 ATP5G2Q06055 141 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 FHL3Q13643 280 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 TATDN3Q17R31 274 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 BEAN1Q3B7T3 259 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 C10orf55Q5SWW7 151 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 C9orf66Q5T8R8 295 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 ASPHD1Q5U4P2 390 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 H2BFWTQ7Z2G1 175 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 ADAD2Q8NCV1 583 aaKnown RBP11.41□□□□□ -0.58
CHD1-202ENST00000414220 OR4C16Q8NGL9 310 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 OR1L8Q8NGR8 309 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 OR13C8Q8NGS7 320 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 OR4A16Q8NH70 328 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 MARCH1Q8TCQ1 289 aa11.41□□□□□ -0.58
CHD1-202ENST00000414220 TEX13DA0A0J9YY54 714 aaPredicted RBP11.4□□□□□ -0.58
CHD1-202ENST00000414220 RBMXL2O75526 392 aaKnown RBP11.4□□□□□ -0.58
CHD1-202ENST00000414220 IL6RP08887 468 aaPredicted RBP11.4□□□□□ -0.58
CHD1-202ENST00000414220 TRAPPC2P0DI81 140 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 TRAPPC2BP0DI82 140 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 PI3P19957 117 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 ZP3P21754 424 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 TRIM16LQ309B1 348 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 KPRPQ5T749 579 aaPredicted RBP11.4□□□□□ -0.58
CHD1-202ENST00000414220 NECAP1Q8NC96 275 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 TMEM56Q96MV1 263 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 QTRT1Q9BXR0 403 aaKnown RBP11.4□□□□□ -0.58
CHD1-202ENST00000414220 THYN1Q9P016 225 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 KCNIP3Q9Y2W7 256 aa11.4□□□□□ -0.58
CHD1-202ENST00000414220 PKD1L1Q8TDX9 2849 aa11.4□□□□□ -0.59
CHD1-202ENST00000414220 HMX3A6NHT5 357 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 PSMB6P28072 239 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 ETV6P41212 452 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 INSL3P51460 131 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 AKR1C2P52895 323 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 RHOGP84095 191 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 FAAP20Q6NZ36 180 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 CCDC190Q86UF4 302 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 OR51S1Q8NGJ8 323 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 OR6Q1Q8NGQ2 317 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 OR5B3Q8NH48 314 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 RNASE11Q8TAA1 199 aaKnown RBP11.39□□□□□ -0.59
CHD1-202ENST00000414220 SLC2A8Q9NY64 477 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 PEF1Q9UBV8 284 aaKnown RBP11.39□□□□□ -0.59
CHD1-202ENST00000414220 OR51B2Q9Y5P1 312 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 PLXNB1O43157 2135 aa11.39□□□□□ -0.59
CHD1-202ENST00000414220 IGHV4OR15-8A0A075B7B6 117 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 A0A087WW49 117 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 TRAV3A0A0B4J244 114 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 PIGBOS1A0A0B4J2F0 54 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 SEC14L6B5MCN3 397 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 TEX22C9J3V5 150 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 OVOL1O14753 267 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 CRYGCP07315 174 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 MECP2P51608 486 aaKnown RBP11.38□□□□□ -0.59
CHD1-202ENST00000414220 OR2B8PP59922 312 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 DHODHQ02127 395 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 FOXB2Q5VYV0 432 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 SGPP2Q8IWX5 399 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 GDPD1Q8N9F7 314 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 OR1L6Q8NGR2 347 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 LSM10Q969L4 123 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms