RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 OR11L1Q8NGX0 322 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR10R2Q8NGX6 335 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 DEDD2Q8WXF8 326 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 PGLYRP4Q96LB8 373 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 GAL3ST1Q99999 423 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 CCDC32Q9BV29 185 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 SELENOIQ9C0D9 397 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 DNTTIP1Q9H147 329 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 ATG5Q9H1Y0 275 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 MYOZ1Q9NP98 299 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 TREM2Q9NZC2 230 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 EXTL2Q9UBQ6 330 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 GLS2Q9UI32 602 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 ST3GAL6Q9Y274 331 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 V9GYH0 126 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 TENM4Q6N022 2769 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 CENPEQ02224 2701 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 ABCA12Q86UK0 2595 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 PPIAL4EA0A075B759 164 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 TRAV38-1A0A0B4J264 116 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 IGHV1-69-2A0A0G2JMI3 117 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 A0A0J9YXY3 114 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 FAM25AB3EWG3 89 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 FAM25CB3EWG5 89 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 FAM25GB3EWG6 89 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 GABARAPH6UMI1 98 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 MFNGO00587 321 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 GSTZ1O43708 216 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 PDCD6O75340 191 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 MMP23AO75900 390 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 CSN2P05814 226 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 PPIAL4FP0DN26 164 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 HIST1H1DP16402 221 aaKnown RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 PRKACAP17612 351 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 CDK2P24941 298 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 BLVRBP30043 206 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 EFNA4P52798 201 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 TMEM33P57088 247 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 TAS2R20P59543 309 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 CCL8P80075 99 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 PAX5Q02548 391 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 SSBP1Q04837 148 aaKnown RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 IL18Q14116 193 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 KCNJ8Q15842 424 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 TAF9Q16594 264 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 MICBQ29980 383 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 SPRNQ5BIV9 151 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 TMEM69Q5SWH9 247 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 HACD4Q5VWC8 232 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 TEX36Q5VZQ5 186 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 FAM131AQ6UXB0 335 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 ZNF826PQ6ZT77 177 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 BIVMQ86UB2 503 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 GAPTQ8N292 157 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 ZCCHC24Q8N2G6 241 aaKnown RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 Q8N7P7 452 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 CHST4Q8NCG5 386 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR4M1Q8NGD0 313 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR4D5Q8NGN0 318 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 C7orf33Q8WU49 177 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 LRRC29Q8WV35 223 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 SMIM4Q8WVI0 70 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 DCUN1D4Q92564 292 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 RDH5Q92781 318 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 EMG1Q92979 244 aaKnown RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 SRRQ9GZT4 340 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 MAGT1Q9H0U3 335 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 NCOR1P1Q9H4R4 102 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 BANF2Q9H503 90 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 AUNIPQ9H7T9 357 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 TMEM106BQ9NUM4 274 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 UFSP2Q9NUQ7 469 aa3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 RBFOX1Q9NWB1 397 aaKnown RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 RBMX2Q9Y388 322 aaKnown RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 GCN1Q92616 2671 aaKnown RBP3.38□□□□□ -1.87
HMGB3P19-201ENST00000403971 CR1P17927 2039 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 NBPF19A0A087WUL8 3843 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 UTP20O75691 2785 aaKnown RBP3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 ABCA2Q9BZC7 2435 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 TRBV6-6A0A0A6YYG2 114 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 A0A0G2JMP0 313 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 A0A0X1KG70 313 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 A0A1B0GUS0 222 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 ISPDA4D126 451 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR2AT4A6NND4 320 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 MCRIP1C9JLW8 97 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 GEMIN2O14893 280 aaKnown RBP3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 DEGS1O15121 323 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 SOCS1O15524 211 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 RP2O75695 350 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR7C1O76099 320 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 CYB5R3P00387 301 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 CSF3P09919 207 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 PSG2P11465 335 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 ZNF44P15621 663 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 DTYMKP23919 212 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 PRSS3P35030 304 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 CBX5P45973 191 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 ACTBP60709 375 aa3.37□□□□□ -1.87
HMGB3P19-201ENST00000403971 ACTG1P63261 375 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms