RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HSPE1P61604 102 aaKnown RBP16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 PLGLAQ15195 96 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 TMUB2Q71RG4 321 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 OR2C3Q8N628 320 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 COMMD5Q9GZQ3 224 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 FBXL15Q9H469 300 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 ZNF430Q9H8G1 570 aaPredicted RBP16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 PSENENQ9NZ42 101 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 TCF19Q9Y242 345 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 ZNF257Q9Y2Q1 563 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 SIGLEC9Q9Y336 463 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 SOX21Q9Y651 276 aaPredicted RBP16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 WSB1Q9Y6I7 421 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 ITPR3Q14573 2671 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 RRHO14718 337 aa16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 TMEM50AO95807 157 aa16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 PDLIM3Q53GG5 364 aaPredicted RBP16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 FBLN7Q53RD9 439 aa16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 MMD2Q8IY49 270 aa16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 NPBQ8NG41 125 aa16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 SMIM8Q96KF7 97 aa16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 CLCC1Q96S66 551 aa16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 ARL6Q9H0F7 186 aa16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 LYRM2Q9NU23 88 aaPredicted RBP16.33■□□□□ 0.21
VCPKMT-202ENST00000395860 ABCA1O95477 2261 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 FAM24AA6NFZ4 105 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 OPN1MWP04001 364 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 OPN1MW2P0DN77 364 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 OPN1MW3P0DN78 364 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 C4BPBP20851 252 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 S100A11P31949 105 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 PPP1R27Q86WC6 154 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 KCNRGQ8N5I3 272 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 Q8N6K4 173 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 OR5B3Q8NH48 314 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 CIB3Q96Q77 187 aaPredicted RBP16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 HINT2Q9BX68 163 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 CCDC168Q8NDH2 2452 aa16.33■□□□□ 0.2
VCPKMT-202ENST00000395860 TEX50A0A1B0GTY4 177 aa16.32■□□□□ 0.2
VCPKMT-202ENST00000395860 H3BP45 60 aa16.32■□□□□ 0.2
VCPKMT-202ENST00000395860 NDUFA3O95167 84 aa16.32■□□□□ 0.2
VCPKMT-202ENST00000395860 HOXA1P49639 335 aaPredicted RBP16.32■□□□□ 0.2
VCPKMT-202ENST00000395860 DYNLT3P51808 116 aa16.32■□□□□ 0.2
VCPKMT-202ENST00000395860 TAS2R30P59541 319 aa16.32■□□□□ 0.2
VCPKMT-202ENST00000395860 PRSS8Q16651 343 aa16.32■□□□□ 0.2
VCPKMT-202ENST00000395860 NCBP2LA6PVI3 153 aaKnown RBP16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 TSC22D2O75157 780 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 FSHBP01225 129 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 PJVKQ0ZLH3 352 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 MRGPRG-AS1Q2M3A8 158 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 SSX3Q99909 188 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 SLC25A31Q9H0C2 315 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 HIPK2Q9H2X6 1198 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 ENY2Q9NPA8 101 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 ACTL6BO94805 426 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 PRCDQ00LT1 54 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 OPCMLQ14982 345 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 TNXAQ16473 311 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 LRRC75BQ2VPJ9 315 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 SPANXN5Q5MJ07 72 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 TMEM252Q8N6L7 170 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 OR1L8Q8NGR8 309 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 C1RLQ9NZP8 487 aa16.31■□□□□ 0.2
VCPKMT-202ENST00000395860 CREBBPQ92793 2442 aa16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 TNCP24821 2201 aa16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 KANTRA0A1W2PQU2 76 aa16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 IGSF23A1L1A6 192 aa16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 CD5LO43866 347 aa16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 LY86O95711 162 aa16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 MAS1LP35410 378 aa16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 PLEKHA3Q9HB20 300 aa16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 HEYLQ9NQ87 328 aaPredicted RBP16.3■□□□□ 0.2
VCPKMT-202ENST00000395860 EWSR1Q01844 656 aaKnown RBP eCLIP16.29■□□□□ 0.2
VCPKMT-202ENST00000395860 CLEC9AQ6UXN8 241 aa16.29■□□□□ 0.2
VCPKMT-202ENST00000395860 TEX29Q8N6K0 151 aa16.29■□□□□ 0.2
VCPKMT-202ENST00000395860 OR8H1Q8NGG4 311 aa16.29■□□□□ 0.2
VCPKMT-202ENST00000395860 VDAC2P45880 294 aaPredicted RBP16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 GNB1P62873 340 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 KRTAP1-1Q07627 177 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 C5orf64Q2M2E5 130 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 C10orf55Q5SWW7 151 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 BCL6BQ8N143 479 aaPredicted RBP16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 C22orf15Q8WYQ4 148 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 ARPC5LQ9BPX5 153 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 NDUFA4L2Q9NRX3 87 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 FCN1O00602 326 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 BCL2L11O43521 198 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 NHLH2Q02577 135 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 TMEM267Q0VDI3 215 aaPredicted RBP16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 STX12Q86Y82 276 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 PIFOQ8TCI5 191 aa16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 PAIP2BQ9ULR5 123 aaKnown RBP16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 STRAPQ9Y3F4 350 aaKnown RBP16.28■□□□□ 0.2
VCPKMT-202ENST00000395860 CELSR1Q9NYQ6 3014 aa16.27■□□□□ 0.2
VCPKMT-202ENST00000395860 MDFIC2A0A1B0GVS7 189 aa16.27■□□□□ 0.2
VCPKMT-202ENST00000395860 E7EUB6 86 aa16.27■□□□□ 0.2
VCPKMT-202ENST00000395860 H3BUX3 64 aa16.27■□□□□ 0.2
VCPKMT-202ENST00000395860 CA2P00918 260 aa16.27■□□□□ 0.2
VCPKMT-202ENST00000395860 RPL27AP46776 148 aaKnown RBP16.27■□□□□ 0.2
VCPKMT-202ENST00000395860 RPP30P78346 268 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms